Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20tucumaniae_20[genbank_20GCA_5F001680595.1_202016-07-06] 22,979 sequences; 49,676,379 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq5378 194 2e-44 >seq5378 Length=3710 Score = 194 bits (214), Expect = 2e-44 Identities = 506/769 (66%), Gaps = 52/769 (7%) Strand=Plus/Minus Query 145545 CATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCCGCCCT 145604 ||||| ||| | || | | ||| |||| ||||||| | |||| ||||||||| | Sbjct 2711 CATCTTCATTGCAATAGTCTTGTGAGGGTCATAGCCCTTGATAACAAAATCCTCCGCCTT 2652 Query 145605 GAAGTCATCTATGTCCTCCACCCGCCTCAGGA----TCCTGAGCCTGGGAAAGGGCCGGG 145660 | | || ||| | ||| ||| ||| || || ||| |||||| |||| Sbjct 2651 CCACCCGTCGATG-CTTCCGCCCTTCTCTCGAGTAATCTCCAGCTCTGGAAAGTCACGGG 2593 Query 145661 GGCTCCTGGTCA-GCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCC 145719 | ||| | ||| |||| || || | |||||||||| ||||||||||||||| || Sbjct 2592 G-CTCGCGCTCAAGCTGCGTGTTGAGAGCATCCACGTGGTCGAGGTAGACGTGCGCATCG 2534 Query 145720 CCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTC 145779 |||| |||||| ||| | || ||| | | | || ||| || | ||||| ||| Sbjct 2533 CCCATGACGTGAGTGAGGCTGCCAGGCACCAATTCGCAGACGTGCGCCATCATGTGTGTC 2474 Query 145780 AGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGG 145839 ||||| | ||||||||| |||||||| || || || || |||||||| | || |||||| Sbjct 2473 AGCAGTGCGTAGCTGGCAATGTTGAACGGGACGCCGAGACCCATGTCGCAGGATCGCTGG 2414 Query 145840 TACAGCTGGCAG-------------GAGA-----------GCTCCCCGCCC--------- 145866 || ||||||||| ||| |||| || || Sbjct 2413 TAGAGCTGGCAGTGCAGGTGGCCCTGAGGCTTGGCATCTGGCTCGTCGTCCTTTCGTCGA 2354 Query 145867 ------GCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGG 145920 | |||||||||||| | | |||||| || || ||| |||| ||| Sbjct 2353 GGGTAGGAGACGTAGAACTGGGCAAACATGTGGCATGGGGGGAGGACCATTTTCTTCAGA 2294 Query 145921 TCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTC-TCGGGGTTCCTCTTGATCTC 145979 || || ||||||||||||| || | || | | | || | ||||| | | || Sbjct 2293 TCGGCAGGGTTCCAGGCGGAAAGAATCAGACGGC-GATCGTACGGGTTGGTGCGCAGCTT 2235 Query 145980 CCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCAC 146039 || | || ||||||||| ||||||| ||| ||| || ||||||| || || Sbjct 2234 GTGAATAATCTCGGCGAGCTGGTCGACGCCCTTGCCCGTGTAGTCCGTCTTGGCATCAAC 2175 Query 146040 GTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTC 146099 |||| |||| || ||||| | ||| ||||| ||||| ||||| || || || ||| ||| Sbjct 2174 GTACTCGGCGCCAAAGTGTCGCCATTGGAAGCCGTACACGGGGCCGAGATCGCCGACCTC 2115 Query 146100 CCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTT 146159 | ||| || ||| | ||||||| || ||||| || ||| ||||||||||||| Sbjct 2114 GCGGTGGTTGAGGCCGAGGTTGTCGAGGAACTCGCGGGAGCCATTGCCGTCCCAGATCTT 2055 Query 146160 GACGCC--CCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGC 146217 || ||| |||||| ||| ||| ||||| ||| ||| |||||||||||| ||| Sbjct 2054 GATGCCGGCCTCGCTGAG-GCT-GGTGGAGGATGTGTTGCCCTCGATGAACCAGAGGAGC 1997 Query 146218 TCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266 || ||| ||| | | |||||| | ||||||||| || ||||||| Sbjct 1996 TCGGCGATGACGGCGCGGGTGAAGACGCGCTTGGTGGTGAGGAGGGGGA 1948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589907307815160