Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20tucumaniae_20[genbank_20GCA_5F001680595.1_202016-07-06] 22,979 sequences; 49,676,379 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq3398 140 4e-28 >seq3398 Length=5185 Score = 140 bits (154), Expect = 4e-28 Identities = 369/558 (66%), Gaps = 8/558 (1%) Strand=Plus/Plus Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720 ||||| || ||| ||| ||||||||||| | | || | ||||||||||| || || Sbjct 1274 CATGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGG 1333 Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780 || ||||| ||||||||||| || ||||| || ||||| ||||| | || ||||| Sbjct 1334 CCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAG 1393 Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA--ACCGGCGC-TGTCATGT 32837 || || || || || ||||| || | || | || || | || | | |||| || Sbjct 1394 ATACCCTCGACGGCAGCAAAAGCGACGAGACGCTGAGCAAAGGACGAGTTCTTGTCCTGG 1453 Query 32838 ATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 32896 ||||| | || ||||| ||||||||||| | || || || ||||| || || || Sbjct 1454 ATCCATCGGATG-GCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTT 1512 Query 32897 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACAT 32956 ||||| ||| || || | | || || | || || ||||| | || || | Sbjct 1513 GAAGAGGTAGGTTCGTTGAGCAGGCTCCTTGATGTAGGTGTCAATGAGGAGCGAGTAGGT 1572 Query 32957 TTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAAT 33016 || || || ||||| || || || || || ||||||||||||| ||||||| || Sbjct 1573 CTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGGGCCTCGGGGAT 1632 Query 33017 CTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGC 33076 ||| || || | ||||| || | | || || || || || |||||| || || Sbjct 1633 CTGGACCTCGCCGCTGAATCGCTCGACAAGGTTCTCGTTGACGATGCCGTCAGATGCAGC 1692 Query 33077 AAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTTATTCCA 33133 || || || | | || | || | | ||||| | || | | || ||||| Sbjct 1693 GAAGAAGGCGAGGATGTGGGAGACGAAGAACTGCTCGTCGGCAGTCAGGCGGTTGTTCCA 1752 Query 33134 ATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 33193 || | || ||| || |||| ||| | || || | ||||| || || ||||| ||||| Sbjct 1753 GTCGTGGAGATCCTTGGATAAATCAATCTCCTCGGCAGTCCAGAAAGAGGCCTCGGCCTT 1812 Query 33194 TTTATACATATTCCAGAT 33211 || ||||| | |||||| Sbjct 1813 CTTGTACATCTGCCAGAT 1830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633449997128400