Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20tucumaniae_20[genbank_20GCA_5F001680595.1_202016-07-06] 22,979 sequences; 49,676,379 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq3398 129 7e-25 >seq3398 Length=5185 Score = 129 bits (142), Expect = 7e-25 Identities = 528/822 (64%), Gaps = 33/822 (4%) Strand=Plus/Plus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 |||||| || || ||||||||||||||||| ||||| || | | | ||| |||||||| Sbjct 988 GTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTCCAT 1047 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCCCAATCTGTTTGAGG 125872 || || || ||||| | | || | | | |||| || | |||| Sbjct 1048 GAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTG-----CCGAGGGCGACGAGG 1102 Query 125873 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGG 125932 || || || | |||| |||| ||||||| ||| || | |||||| |||| ||| Sbjct 1103 AGGCGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCGGCGTTCATGCCGAGCAGG 1162 Query 125933 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATG 125992 || ||||| || || | |||| ||| |||||| ||||| || | |||| Sbjct 1163 GCGCAGGGGAGGGCCTCGGTCAGGAACTCCTGCTCAATGGTGACGGCATCGGTGATGATG 1222 Query 125993 GCGTGAATGGTGTCCACCC---CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCA 126049 | || ||| | | | || | | ||| | | | || ||| || | || Sbjct 1223 TCCTGGATGACCTGCTTGCTGGCACGGCCCTTGAGGTGGGAGTGGAGGAGG--CATG-CA 1279 Query 126050 AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGC 126109 || || ||| |||||||||||||| |||||||| || || || ||| ||| || ||| Sbjct 1280 AAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCAGGC 1339 Query 126110 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCC 126169 ||||| || |||||||| | |||||| || | ||| | ||| ||||||||| ||| Sbjct 1340 ATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCC 1399 Query 126170 TCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC---AAAC 126226 || || || || || | |||||||| ||||||||| ||| || |||| | | Sbjct 1400 TCGACGGCAGCAAAAGCGACGAGACGCTGAGCAAAGGA---CGAGTTCTTGTCCTGGATC 1456 Query 126227 CACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAG 126286 || || ||||| | ||||| || ||| || |||| ||||| || || | ||| Sbjct 1457 CATCGGATGGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTGAAG 1516 Query 126287 AGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCG 126346 || | | || | || || |||||||| | || ||||| || || || ||| Sbjct 1517 AGGTAGGTTCGTTGAGCAGGCTCCTTGATGTAGGTGTCAATGAGGAGCGAGTAGGTCTCG 1576 Query 126347 CCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTG 126405 ||||| | | ||| || | ||| | ||||||| | || || ||| ||||| Sbjct 1577 GAGTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGGGCCTCGGGGATCTG 1635 Query 126406 TACCTCATCGGCAAAATTGTTATTGATA---TTCTCAAAAACAATTCCATCGGACCCAGC 126462 ||||| | || ||| | | || | ||||| || || || || || |||| Sbjct 1636 GACCTC-GCCGCTGAATCG--CTCGACAAGGTTCTCGTTGACGATGCCGTCAGATGCAGC 1692 Query 126463 AAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCA 126519 || || || ||||| | | ||| ||| || | | ||| || | ||||| Sbjct 1693 GAAGAAGGCGAGGATGTGGGAGACGAAGAACTGCTCGTCGGCAGTCAGGCGGTTGTTCCA 1752 Query 126520 GTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 ||||| |||||||| || | ||| | |||||| |||||||| Sbjct 1753 GTCGTGGAGATCCTTGGATAAATCAATCTCCTCGGCAGTCCA 1794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597182017645320