Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20tucumaniae_20[genbank_20GCA_5F001680595.1_202016-07-06] 22,979 sequences; 49,676,379 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq8513 248 1e-60 seq3398 132 6e-26 >seq8513 Length=2088 Score = 248 bits (274), Expect = 1e-60 Identities = 972/1509 (64%), Gaps = 51/1509 (3%) Strand=Plus/Minus Query 111546 TATTTTGGTCTCAAGACCCTCGAGAAAAGCTACCTCCA-AAGACTGGATGGTGTCTTGAT 111604 || ||||| ||||||| || ||| | |||||||| |||| || |||| | | Sbjct 1809 TACTTTGGCTTCAAGACTCTTGAGCGATCCTACCTCCTCAAGATTG-ATGGCAAGATTGT 1751 Query 111605 GGAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGA 111664 || || ||| ||||| ||||||| || | |||| ||| || || |||||||| Sbjct 1750 TGAGCGTCCCCAGCACATGATCATGCGTGTGTCTGTCGGCATCTGGGGTGACGATATTGA 1691 Query 111665 TTCTGTTTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAAC 111724 ||| ||||||| ||| || |||||| | | |||| ||| || | || || Sbjct 1690 GCGTGTCCTGGAGACCTACAACCTGATGTCGAGCAAATTCTTCACCCATGCCTCCCCCAC 1631 Query 111725 CCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAA 111784 ||||||||| |||||||| || || || ||||| || ||||| | | | || Sbjct 1630 CCTCTTCAATGCTGGTACTCCCCAGCCTCAGCTGTCCTCATGCTTCCTGGTCGACATGAA 1571 Query 111785 GGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTG 111844 ||||| || | || ||||| | ||||||| |||||| ||||| ||| Sbjct 1570 AGAGGACAGCATTGAGGGTATTTATGATACTCTCAAGACCTGTGCCATGATCTCCAAGAT 1511 Query 111845 GGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGG 111904 ||| ||||||||||| || || |||| || | |||| ||| || || Sbjct 1510 GGCGGGTGGTATCGGCCTGAACGTCCACCGAATCCGTGCCACTGGCTCTTACATCGCTGG 1451 Query 111905 TACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 111964 ||| || ||| || | ||| | | || |||||||| || || ||| ||| || || Sbjct 1450 TACCAACGGTACCTCCAACGGTGTCACCCCCATGCTTCGTGTCTTCAACAACACTGCCCG 1391 Query 111965 CTATGTAAACCAAGCTGGGCGTCGCAAGGGATCTA------TCGCAGTCTATCTTGAGCC 112018 || || |||| | ||| |||| || || | || |||| |||||||| Sbjct 1390 GTACGTCGACCAGGGTGGCAA---CAAGCGACCTGGTGCCTTTGCCATCTACCTTGAGCC 1334 Query 112019 ATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGC 112078 |||||||| ||| || | ||||||||||| |||| ||||| || | ||||||| Sbjct 1333 CTGGCACGCAGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGT 1274 Query 112079 GCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGA 112138 || |||||| || ||| |||||||||||||| ||||||||||||||| | || || Sbjct 1273 CCGCGCCCGCGACCTGTTCCTGGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGTCGA 1214 Query 112139 GGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGA-TGCCG 112197 | ||| || | ||| | ||| | ||||| || || |||||||| |||| ||| Sbjct 1213 GAAGAACGGTGACTGGACCCTCATGTGTCCCAACGAGTGCCCCGGTCTGGCCGACTGCTA 1154 Query 112198 TGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAG------AAAGTCGGGCGA 112251 | || |||||||| || || || ||| |||||| ||| | | | |||| || Sbjct 1153 T-GGCGAGGAGTTCGAGGCTCTTTACGAAAAGTATGAGAAGGCGGGCAAGGGTCGCAAGA 1095 Query 112252 CTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTG 112311 | || || |||| || | ||| | || || ||| || | || |||||||| | Sbjct 1094 CCATGAAGG-CCCAGAAGC-----TCTGGTATGCCATCCTCGAGGCGCAGACCGAGACCG 1041 Query 112312 GTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGG 112371 | | || | ||||| ||||| ||| ||| |||| ||||| || || ||||| ||| Sbjct 1040 GCAACCCCTTCATGCTCTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGG 981 Query 112372 GTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGA 112431 | ||| || ||||| ||||| || || || | || | | | |||||| Sbjct 980 GCACCATCCGTAGCTCCAATCTCTGCACCGAGATTATCGAGTACTGCGCCCCTGATGAGG 921 Query 112432 CGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGA 112491 ||||| || ||||| || || | || || || | || || || || | || Sbjct 920 TTGCTGTCTGCAACCTTGCTTCTCTGGCCCTGCC----TTCGTTCAT-CAACTACGATGA 866 Query 112492 CATTTGATTATG------AAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAA 112545 ||| |||| | || | ||||| || || | |||| ||||| | Sbjct 865 TGCTTG-CTATGACTTCCAGAAGTTGCACGACGTCACACAGGTTGTCGTTCGCAACCTGA 807 Query 112546 ACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGAC 112605 |||| |||| || || ||||| ||| | ||||| || || ||| ||| Sbjct 806 ACAGGATTATCGACGTGAACCACTACCCTGTTACGGAAGCTCGCAACAGCAACATGCGAC 747 Query 112606 ACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATT-CTTTGTCGCCAC 112664 |||| || |||||| | |||||||| ||||| || |||| ||| || || || || || Sbjct 746 ACCGACCCATTGGTGTTGGTGTCCAGGGTCTTGCTGATGCTTTCCTTGCTCTG-CG-CAT 689 Query 112665 GCATTT-GATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCA 112723 || ||| || || ||| || || |||| || || || ||||| || || || Sbjct 688 GCCTTTCGAGTCTCCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATCTACCA 629 Query 112724 CGCCGCTCTTGAGGCGAGTTCGG---AGTTGGCAGAGGTTGATGGTCCATATGAAACCTT 112780 || || || || ||||| || |||| ||| || ||||| || ||||| Sbjct 628 TGCTGCCCTCACTGC---TTCGGTGCAGCTGGCCAAGGAGGAGGGTCCCTACTCCACCTT 572 Query 112781 TGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAA 112840 |||| ||||| || || | || | || || || || |||| |||| |||| | | Sbjct 571 CAAGGGCTCTCCCGCCTCTGAGGGTATTCTCCAGTTCGACATGT-GGAATGTGA-AGCCT 514 Query 112841 GCT--TCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAAC 112898 || | || |||||||| ||| ||| | |||||||| | || |||| ||| Sbjct 513 TCTGACCTCTGGGACTGGGAGAACCTCCGGGAGCAGGTCAAGGAGCACGGCATTCGCAAC 454 Query 112899 AGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAA 112958 ||||| || | || || ||||| || ||| || | || ||| |||| || || || Sbjct 453 AGTCTGCTGCTTGCCCCTATGCCTACTGCCAGTACTTCGCAGATCCTGGGCAACAACGAG 394 Query 112959 TGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTG 113018 ||||| || || ||||| | |||||||| | | | | |||||| || ||||| | Sbjct 393 TGCTTCGAGCCTTACACCTCCAACATCTACCAGCGCCGTGTCCTCGCTGGCGAGTTCCAG 334 Query 113019 ATTGTCAAC 113027 | |||||| Sbjct 333 GTCGTCAAC 325 >seq3398 Length=5185 Score = 132 bits (146), Expect = 6e-26 Identities = 204/286 (71%), Gaps = 4/286 (1%) Strand=Plus/Minus Query 102048 CTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGC-AGCTCTTTGAAGCCATCCA 102106 ||||| |||| || || ||||| |||| | | ||| | | ||||| | ||||| | Sbjct 1560 CTCATTGACACCTACATCAAGGAGCCTGCTCA-ACGAACCTACCTCTTCAACGCCATTGA 1502 Query 102107 AACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGT 102165 || | || || || | ||||| || || ||||| || ||| | | |||| Sbjct 1501 GACCATCCCCTGCATCCGCAAGAAGGCCGACTGGGCCATCCGATGGATCCAGGACAAGAA 1442 Query 102166 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 102225 | ||| |||||||| |||| ||| |||| ||||| || ||||||||||||||| | Sbjct 1441 CTCGT-CCTTTGCTCAGCGTCTCGTCGCTTTTGCTGCCGTCGAGGGTATCTTCTTCAGCG 1383 Query 102226 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 102285 || |||| | | || | |||||||||||||| || |||||||| || || ||| | Sbjct 1382 GTGCCTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTTT 1323 Query 102286 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 |||||||||| ||||||||||||||||| || ||| || ||||| Sbjct 1322 CCAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACCGACTTTGC 1277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620564099504880