Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20tucumaniae_20[genbank_20GCA_5F001680595.1_202016-07-06] 22,979 sequences; 49,676,379 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq8513 201 1e-46 >seq8513 Length=2088 Score = 201 bits (222), Expect = 1e-46 Identities = 921/1437 (64%), Gaps = 39/1437 (3%) Strand=Plus/Plus Query 105895 GTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGG 105954 |||||| | | ||||| || |||||| | | | | |||||||| | ||||| || Sbjct 325 GTTGACGACCTGGAACTCGCCAGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAGG 384 Query 105955 TTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCAT 106014 || ||||| || || || |||| ||| || | || ||| || ||||| || || | Sbjct 385 CTCGAAGCACTCGTTGTTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCAAG 444 Query 106015 CAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTA 106074 || |||||||| |||| || | ||||||| | ||| ||| |||||||| | Sbjct 445 CAGCAGACTGTTGCGAATGCCGTGCTCCTTGACCTGCTCCCGGAGGTTCTCCCAGTCCCA 504 Query 106075 GTTG--AGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGA 106132 | | || || ||||| |||| |||| || || || || | || | || | |||| Sbjct 505 GAGGTCAGAA-GGCTTCACATTCC-ACATGTCGAACTGGAGAATACCCTCAGAGGCGGGA 562 Query 106133 GAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATT-CACAGCTCGCCTCCAG 106191 || |||| || || |||| ||| | | | |||| | ||| | || || Sbjct 563 GAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCCAGCTGCACCGAA-GCAGTGAG 621 Query 106192 GGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATC 106251 || || || || ||||| || ||||| | || | ||| || || || || Sbjct 622 GGCAGCATGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGAGACTC 681 Query 106252 -AAATGCGTAGCGGCACAA-AATAAATACATCCGCGAGACCTTGAACACCCAAACCAATA 106309 ||| || | ||| || | || || |||| || ||||| || ||||| | |||||| Sbjct 682 GAAAGGCAT-GCG-CAGAGCAAGGAAAGCATCAGCAAGACCCTGGACACCAACACCAATG 739 Query 106310 GGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATG 106369 |||| ||||||||| || || || || | ||| || || || ||| || Sbjct 740 GGTCGGTGTCGCATGTTGCTGTTGCGAGCTTCCGTAACAGGGTAGTGGTTCACGTCGATA 799 Query 106370 ACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAA 106429 | | ||| || || |||| || ||||| || || | || | | ||| | Sbjct 800 ATCCTGTTCAGGTTGCGAACGACAACCTGTGTGACGTCGTGCAACTTCTGGAAGTCATA- 858 Query 106430 GTGCGAGTCTCTTCAT---TGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACA 106486 || || || || | ||| || || ||||| | || || | ||||| ||| Sbjct 859 --GCAAGCATCATCGTAGTTGATGAACGAAGGCAGGGCCAGAGAAGCAAGGTTGCAGACA 916 Query 106487 GCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATC 106546 || |||||| | |||||| | ||| || || || | ||||| || || Sbjct 917 GCAACCTCATCAGGGGCGCAGTACTCGATAATCTCGGTGCAGAGATTGGAGCTACGGATG 976 Query 106547 GTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGC 106606 || |||| ||||| ||||| ||||| |||||| ||||||||||||||| |||| Sbjct 977 GTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGG 1036 Query 106607 GTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAAT 106665 | || ||||| ||||| | || ||| || || | ||| | | || | | || || Sbjct 1037 TTGCCGGTCTCGGTCTGCGCCTCGAGGATGGCATACCAGAGCTTCTGGGCCT----TCAT 1092 Query 106666 GGCGTTG-GCCCGT--CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACC 106722 || ||| | || | ||| || ||| |||||| ||| || || || |||||||| | Sbjct 1093 GGTCTTGCGACCCTTGCCCGCCTTCTCATACTTTTCGTAAAGAGCCTCGAACTCCTC-GC 1151 Query 106723 CACCGC-GTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCT 106781 || || ||||| ||||| || || || ||||| | || | ||| | ||| || Sbjct 1152 CATAGCAGTCGGCCAGACCGGGGCACTCGTTGGGACACATGAGGGTCCAGTCACCGTTCT 1211 Query 106782 CCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACC 106841 ||| || ||||||||||| || || |||||||| || | || || || | | Sbjct 1212 TCTCGACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCCAGGAACAGGTCGCGGGCGC 1271 Query 106842 GAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCC 106901 | |||| || | || ||||| || | ||||||||||| | || ||| ||||||| Sbjct 1272 GGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCC 1331 Query 106902 ATGGCTCAAGATAGACTGCGA------TAGATCCCTTTCGACGCCCAGCTTGATTTACAT 106955 | |||||||| |||| || | || || ||| | | ||| | || | || | Sbjct 1332 AGGGCTCAAGGTAGATGGCAAAGGCACCAGGTCGCTT--GTTG-CCACCCTGGTCGACGT 1388 Query 106956 AGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTG 107015 | || || ||| ||| || || |||||||| || | | ||| | || ||| || | Sbjct 1389 ACCGGGCAGTGTTGTTGAAGACACGAAGCATGGGGGTGACACCGTTGGAGGTACCGTTGG 1448 Query 107016 TCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAG 107075 | || || ||| | |||| | | |||| || || || ||||| || | Sbjct 1449 TACCAGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGACGTTCAGGCCGATACCACCCG 1508 Query 107076 CCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCT 107135 || ||| ||||| ||||| | | ||||| |||| ||||| | || ||||| Sbjct 1509 CCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATACCCTCAATGCTGTCCT 1568 Query 107136 CCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGA 107195 | || || ||| |||||||| ||||| ||| || || |||||||||||||||| Sbjct 1569 CTTTCATGTCGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGAGTACCAGCATTGAAGA 1628 Query 107196 GGGTTGGTGTTGCGTGAATGAACA--TACCTTGGGACATCTTGTCGTATGTCTCCAAGAC 107253 |||| || | || || |||| | | || |||||| || ||| ||||||| ||| Sbjct 1629 GGGTGGGGGAGGCATGGGTGAAGAATTTGCT--CGACATCAGGTTGTAGGTCTCCAGGAC 1686 Query 107254 AGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGGG 107310 | ||||| || || || |||||||| | ||||||||| | ||||| ||||| Sbjct 1687 ACGCTCAATATCGTCACCCCAGATGCCGACAGACACACGCATGATCATGTGCTGGGG 1743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589811335389960