Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20tucumaniae_20[genbank_20GCA_5F001680595.1_202016-07-06] 22,979 sequences; 49,676,379 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq3152 98.7 8e-16 >seq3152 Length=5241 Score = 98.7 bits (108), Expect = 8e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 ||| || || || ||||| || || || | ||| |||| |||| ||||||||| ||||| Sbjct 3793 CTCCTTCTGGATGTTGTAGTCGGACAGGGTACGACCGTCTTCCAGCTGCTTACCAGCAAA 3852 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 || |||||||| || || | ||| | |||||||||||| |||||| || || Sbjct 3853 GATAAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGAATCTTGGACTTCACGTT 3912 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | | || || ||||||||||| || || || ||||| || | ||| || || Sbjct 3913 GTCAATGGTATCGCTCGACTCCACCTCCAGAGTGATGGTCTTTCCAGTGAGAGTCTTGAC 3972 Query 48755 AAAAATCTGCAT 48766 ||| |||||||| Sbjct 3973 AAAGATCTGCAT 3984 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 ||| || || || ||||| || ||| |||| |||| || | |||||| |||||||| Sbjct 4021 CTCCTTCTGGATGTTGTAGTCGCTGAGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCAAA 4080 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 || |||||||||||||| | |||| ||| |||||||| ||||| ||| ||| Sbjct 4081 GATGAGTCGCTGTTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTCGATTTCACATT 4140 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | | || |||| |||||||| | || || || ||||| || | || || || Sbjct 4141 GTCAATGGTGTCGGACGATTCCACCTCAAGGGTGATGGTCTTTCCGGTGAGGGTCTTGAC 4200 Query 48755 AAAAATCTGCAT 48766 || |||||||| Sbjct 4201 GAAGATCTGCAT 4212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380830915925217