Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20tucumaniae_20[genbank_20GCA_5F001680595.1_202016-07-06] 22,979 sequences; 49,676,379 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq11986 104 3e-17 >seq11986 Length=2053 Score = 104 bits (114), Expect = 3e-17 Identities = 153/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 139294 CAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTC 139353 ||||||| || || || || || || || ||||||||||| ||||| || || |||| | Sbjct 1546 CAGACATGTTGGCCAGAAGAGCCTGGGCAGTGCAGATGTTGCTGGTGGCCTTTTCTCGGC 1605 Query 139354 TAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTCCA 139413 ||| |||||||| | || || || || | | | ||||| || || || |||| Sbjct 1606 GAATGTGCTGCTCACGGGTCTGGAGGGCGAGACGGAGGGCAGGCTTACCGAGGCGGTCCT 1665 Query 139414 CTGACTGACCTACAATTCTGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGA 139473 || ||| |||| | ||| || ||||| | ||| ||||| || | || || |||| Sbjct 1666 TGGAGACACCGACAAGACGGCCGGGGATCTTGCGCTTGTACTTCTCCGAGGTGGCGAAGA 1725 Query 139474 ATGCAGCATGAGGACCTCCGTATCCCATAGGAATACC 139510 | || || |||||||| ||||| |||| ||| | ||| Sbjct 1726 AGGCGGCGTGAGGACCACCGTAGCCCAGAGGCACACC 1762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578832089947080