Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20tucumaniae_20[genbank_20GCA_5F001680595.1_202016-07-06] 22,979 sequences; 49,676,379 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq8513 313 2e-80 seq2302 131 2e-25 seq3152 120 3e-22 seq1887 116 4e-21 >seq8513 Length=2088 Score = 313 bits (346), Expect = 2e-80 Identities = 1138/1753 (65%), Gaps = 55/1753 (3%) Strand=Plus/Plus Query 148053 GACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA---GTCGCTTT 148109 |||||| ||| |||||||| || || ||||| || ||||| | || || | |||| Sbjct 119 GACTGGGACTGATCAATGAAGGCACCTCGGTCGGCAGCCATCTGAACGACCTGGCGCTG- 177 Query 148110 ATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATG 148169 | ||||||||| | |||||||| || ||||| | |||| ||| | |||| Sbjct 178 --CGAAATCTCCCAGACGGTCTTGTAGAGGGCCTTGACCTCGGCGGGGATGTTGGGGATG 235 Query 148170 CGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTG 148229 ||| | || ||| | |||| || | || ||| | |||| | ||| Sbjct 236 TTCTGGATGGAACCGTTCTCGGCAATGATTCGGTTTTTCATGGCATCCGACCACAGGCCC 295 Query 148230 AGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACG 148289 | || | ||||| | || ||| | | || || ||||| |||||||| ||||| || Sbjct 296 ATGTCAACAAGGTCCTTGAGCAGCCAGGGGTTGACGACCTGGAACTCGCCAGCGAGGACA 355 Query 148290 CGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGC 148349 || ||| | || | |||| || | || || || ||||||||||||||| |||||| Sbjct 356 CGGCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTGCCCAGGATCTGC 415 Query 148350 GCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTT 148409 | || | || || ||||| || | |||||| |||||| | ||| | | || Sbjct 416 GAAGTACTGGCAGTAGGCATAGGGGCAAGCAGCAGACTGTTGCGAATGCCGTGCTCCTTG 475 Query 148410 ATTTTGCGCTTCAGAGC--CGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGT 148467 | | || | | ||| | ||||||||||||| || || |||| |||||||||| Sbjct 476 ACCT-GCTCC-CGGAGGTTCTCCCAGTCCCAGAGGTCAGAAGGCTTCACATTCCACATGT 533 Query 148468 CGTACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCG 148527 || |||| ||||| || ||||| ||||| | | | | ||| || || | | Sbjct 534 CGAACTGGAGAATACCCTCAGAGGCGGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCT 593 Query 148528 CCGCCGCCAGTTCGCAGCTC-GCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGC 148586 || ||||| | ||| | || ||| || | | ||| || |||||| || ||| Sbjct 594 CCTTGGCCAGCT-GCACCGAAGCAGTGAGGGCAGCATGGTAGATGGTCTCGAAGATCTGC 652 Query 148587 CTGTTGAGCA---GCGCCGCCG-ACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGC 148642 |||||||| | ||| | | | | ||| | ||||| ||||| | || || Sbjct 653 TTGTTGAGCTCACGAGCCTCGGGAGAC----TCGAAAGGCATGCGCAGAGCAAGGAAAGC 708 Query 148643 GTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGC 148702 || ||||| ||||| || || || |||||||| |||||| |||||| | ||| || Sbjct 709 ATCAGCAAGACCCTGGACACCAACACCAATGGGTCGGTGTCGCATGTTGCTGTTGCGAGC 768 Query 148703 GCTCTCGAGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTT 148762 | | || |||||||| |||||| ||| ||| || ||||| || || |||| Sbjct 769 TTCCGTAACAGGGTAGTGGTTCACGTCGATAATCCTGTTCAGGTTGCGAACGACAACCTG 828 Query 148763 TGTAATTCTGCGCAGCAATTCAAAATCGTA-CTTG--TCATC-TAC--GATGCATCGGTT 148816 ||| | | ||| | | || || || | | ||||| || |||| | Sbjct 829 TGTGACGTCGTGCAACTTCTGGAAGTCATAGCAAGCATCATCGTAGTTGATGAACGAAGG 888 Query 148817 CACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGAT 148876 || ||| | ||| || || ||||| || || |||||| ||||||| |||||| | || Sbjct 889 CAGGGCCAGAGAAGCAAGGTTGCAGACAGCAACCTCATCAGGGGCGCAGTACTCGATAAT 948 Query 148877 CTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTT 148936 ||||| ||| |||||| || ||| ||||| |||||| || |||||||||| ||| Sbjct 949 CTCGGTGCAGAGATTGGAGCTACGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTT 1008 Query 148937 GCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATG-- 148994 ||| ||||||||| |||||| | || ||| || || ||||| || | ||| Sbjct 1009 GCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGCGCCTCGAGGATGGC 1068 Query 148995 AACCGATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCT------CCTGCTCG 149048 | | | || | ||| || ||| || || | |||||||| ||| ||| Sbjct 1069 ATACCAG--AGCTTCTGGGC-----CTTCATGGTCTT-GCGACCCTTGCCCGCCTTCTCA 1120 Query 149049 TA--TAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACT 149106 || | ||| | |||| |||||| ||||||| ||||| ||| | ||||||||||||| Sbjct 1121 TACTTTTCGTAAAGAGCC--TCGAACTCCTCGCCATAGCAGTCGGCCAGACCGGGGCACT 1178 Query 149107 TGTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGG 149166 || || |||||||| | ||| | |||| | | || |||||||| || ||||||| Sbjct 1179 CGTTGGGACACATGAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGATCGG 1238 Query 149167 GCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGC 149226 | | |||||| || | |||||||| || | || || ||| ||| || Sbjct 1239 GAATCCAGAGAGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGC 1298 Query 149227 GCAGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGC 149286 |||||| || | || | || |||||||| ||||||| ||| | || | || | Sbjct 1299 GCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCAC 1358 Query 149287 CCTTGCGC---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCA 149343 | ||| ||||| ||||||||||||| || | ||||||| || || |||| || Sbjct 1359 CAGGTCGCTTGTTGCCACCCTGGTCGACGTACCGGGCAGTGTTGTTGAAGACACGAAGCA 1418 Query 149344 TAGGTTCAATGCCACTGGCAGTGCCGTTAGTA-GAGCTAATGCGACTGCCGCGCGCTCGC 149402 | || | || ||| || ||||| ||| ||| ||| | ||| || || Sbjct 1419 TGGGGGTGACACCGTTGGAGGTACCGTTGGTACCAGC-GATGTAAGAGCCAGTGGCACGG 1477 Query 149403 ACTTTGTGCACGTTGACGCCGATGCC-GCCGCCGTACTTTGAGATGGCCGCGCAGTCGCC 149461 | | ||| ||||| | |||||| || ||||| | ||| ||||| || ||| Sbjct 1478 ATTCGGTGGACGTTCAGGCCGATACCACCCGCCAT-CTTGGAGATCATGGCACAGGTCTT 1536 Query 149462 GAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCA 149521 ||| || || || ||||| |||||||| |||||| | ||| ||||| ||| | Sbjct 1537 GAGAGTATCATAAATACCCTCAATGCTGTCCTCTTTCATGTCGACCAGGAAGCATGAGGA 1596 Query 149522 CATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTT 149581 || || || | || || || ||| | ||||||| ||| || || || |||| Sbjct 1597 CAGCTGAGGCTGGGGAGTACCAGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAGAATTT 1656 Query 149582 -CTGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTA 149640 || | ||||| | ||| | ||| || || || || || || || || |||||| | Sbjct 1657 GCTCG-ACATCAGGTTGTAGGTCTCCAGGACACGCTCAATATCGTCACCCCAGATGCCGA 1715 Query 149641 TGGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCA 149700 | || ||||| | ||| ||||| || ||||| | | ||| |||| ||||| | Sbjct 1716 CAGACACACGCATGATCATGTGCTGGGGACGCTCAACAATCTTGCCATCAATCTTGAGGA 1775 Query 149701 AGTAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGT 149760 |||| || || |||||| |||||||||||| ||| | ||||| ||| | | | Sbjct 1776 GGTAGGATCGCTCAAGAGTCTTGAAGCCAAAGTACTGGTATTGGAAGTCACGGTCATAGA 1835 Query 149761 CAATGGCGGCGTC 149773 ||||||| | ||| Sbjct 1836 CAATGGCCGAGTC 1848 >seq2302 Length=6171 Score = 131 bits (144), Expect = 2e-25 Identities = 150/199 (75%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 |||| ||| ||||| || ||||| |||| || ||| | | | |||||||||||||||| Sbjct 873 GGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA-TCCTCGAGCTGCTTGC 815 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||| |||||||||||||| |||||||| |||||||| |||||| || Sbjct 814 CAGCAAAGATGAGTCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACT 755 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | ||||||| | |||||| |||| ||||| || || || || || | Sbjct 754 TGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATTGTCTTCCCCGTGAGGG 695 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || |||||||| Sbjct 694 TCTTGACAAAGATCTGCAT 676 >seq3152 Length=5241 Score = 120 bits (132), Expect = 3e-22 Identities = 147/199 (74%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521 || ||||| ||||| || ||||| |||| | || || || |||||||||||||||| Sbjct 4016 GTCGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTTCGGCCG--TCCTCGAGCTGCTTGC 4073 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||| ||||| || || ||||| |||||||||||||| |||||| | Sbjct 4074 CGGCAAAGATGAGTCGCTGTTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTCGATT 4133 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| ||||||| | ||||| || | ||||| ||| || ||||| || | Sbjct 4134 TCACATTGTCAATGGTGTCGGACGATTCCACCTCAAGGGTGATGGTCTTTCCGGTGAGGG 4193 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 4194 TCTTGACGAAGATCTGCAT 4212 Score = 111 bits (122), Expect = 2e-19 Identities = 139/188 (74%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| | | ||| | | | ||||| ||||||||||| Sbjct 4244 GTTGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTGCGGCCA-TCCTCAAGCTGCTTGCC 4302 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| |||| || ||||||||||| ||||| || || ||||| || |||||| ||| Sbjct 4303 GGCGAAAATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTATCTTGGATCTTCGACTT 4362 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||||| | |||||| |||| ||||| || || || || || || Sbjct 4363 GACGTTGTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCAGTGAGGGT 4422 Query 133643 TTTTACGA 133650 || |||| Sbjct 4423 CTTGACGA 4430 Score = 109 bits (120), Expect = 5e-19 Identities = 132/177 (75%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||| ||||| || ||||||||| | ||| | | | ||||| |||||||||| Sbjct 4518 GGTCGACTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCA-TCCTCAAGCTGCTTGC 4576 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| |||| || |||||||||||||| |||||||| |||||||| ||||| || Sbjct 4577 CGGCGAAAATCAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTCGACT 4636 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638 ||| | || | || || | || ||| || |||| ||| | ||| ||||| |||| Sbjct 4637 TGACATTGTCGATGGTATCCGAGGACTCGACCTCGAGGGTAATGGTCTTGCCCGTCA 4693 Score = 105 bits (116), Expect = 6e-18 Identities = 148/206 (72%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGC 133514 ||| | ||| ||||| ||||| || ||||| ||| || || |||| ||| || ||| Sbjct 3781 ATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGT--ACGACCGTCTTCCAGC 3838 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || || | || || ||||||||||| || |||||||| |||||||| ||| Sbjct 3839 TGCTTACCAGCAAAGATAAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGAATC 3898 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||| | | |||| || ||| | | |||||| || | |||| ||| || || Sbjct 3899 TTGGACTTCACGTTGTCAATGGTATCGCTCGACTCCACCTCCAGAGTGATGGTCTTTCCA 3958 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || ||||| || || || |||||||| Sbjct 3959 GTGAGAGTCTTGACAAAGATCTGCAT 3984 >seq1887 Length=5954 Score = 116 bits (128), Expect = 4e-21 Identities = 114/147 (78%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| ||||||||||| ||| | || || ||||||||||| || |||||||| |||||| Sbjct 4606 TCCTCCAGCTGCTTGCCAGCGAAGATCAGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTG 4547 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | |||| ||||| | || ||| || |||| ||||| | Sbjct 4546 TCCTGGATCTTGGACTTGACATTGTCAATGGTGTCCGAGGACTCGACCTCGAGGGTGATG 4487 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAA 133652 || ||||| ||||| || || |||||| Sbjct 4486 GTCTTGCCCGTCAGGGTCTTCACGAAA 4460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483281943417960