Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20tucumaniae_20[genbank_20GCA_5F001680595.1_202016-07-06] 22,979 sequences; 49,676,379 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq5378 125 8e-24 >seq5378 Length=3710 Score = 125 bits (138), Expect = 8e-24 Identities = 476/747 (64%), Gaps = 50/747 (7%) Strand=Plus/Minus Query 146802 GTGCGGGTGGTAGCCCTCGAGGGCAAAATCTTCTGCCCTGAAATCGTCTATGTCCTCCAC 146861 ||| |||| ||||||| || ||||||| || ||| | | |||| ||| | ||| | Sbjct 2690 GTGAGGGTCATAGCCCTTGATAACAAAATCCTCCGCCTTCCACCCGTCGATG-CTTCCGC 2632 Query 146862 CCGCCTCAA----AATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTT 146917 || ||| ||||| |||| || ||| ||||| | | | ||||| | | Sbjct 2631 CCTTCTCTCGAGTAATCTCCAGCTCTGGAAAGTCACGGGGCTCGCGCTCAAGCTGCGTGT 2572 Query 146918 TCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCC 146977 | || | |||||||||| ||||||||||||||| || |||| | ||| | | | Sbjct 2571 TGAGAGCATCCACGTGGTCGAGGTAGACGTGCGCATCGCCCATGACGTGAGTGAGGCTGC 2512 Query 146978 CCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGT 147037 | ||| | || ||||| |||| ||||| || ||||| | ||||||||| |||| Sbjct 2511 CAGGCACCAATTCGCAGACGTGCGCCATCATGTGTGTCAGCAGTGCGTAGCTGGCAATGT 2452 Query 147038 TGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCT--C 147095 |||| ||||| || || |||||||| | || | |||||| |||||||| || | | Sbjct 2451 TGAACGGGACGCCGAGACCCATGTCGCAGGATCGCTGGTAGAGCTGGCAGTGCAGGTGGC 2392 Query 147096 CC-------------------CGTCGGCC------------------ACGTAAAACTGGC 147118 || ||||| || ||||| |||||| Sbjct 2391 CCTGAGGCTTGGCATCTGGCTCGTCGTCCTTTCGTCGAGGGTAGGAGACGTAGAACTGGG 2332 Query 147119 ACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGA 147178 | |||||||| || || || |||| ||| || || ||||||||||| || | Sbjct 2331 CAAACATGTGGCATGGGGGGAGGACCATTTTCTTCAGATCGGCAGGGTTCCAGGCGGAAA 2272 Query 147179 CCACCAGCCGCCTGCTC-TCGGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGCTGG 147237 | ||| || | | || | ||||| | | || | |||| | |||||| Sbjct 2271 GAATCAGACGGC-GATCGTACGGGTTGGTGCGCAGCTTGTGAATAATCTCGGCGAGCTGG 2213 Query 147238 TCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAAGTGCCTC 147297 || ||||||| |||| ||||| ||| | || |||||| ||| |||||||| | | Sbjct 2212 TCGACGCCCTTGCCCGTGTAGTCCGTCTTGGCATCAACGTACTCGGCGCCAAAGTGTCGC 2153 Query 147298 CACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCCGCCCGC 147357 || |||||||||||||| || || || |||||| || | ||| || ||| Sbjct 2152 CATTGGAAGCCGTACACGGGGCCGAGATCGCCGACCTCGCGGTGGTTGAGGCCGAGGTTG 2093 Query 147358 TTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCC--CTTGGCGGAGAGCT 147415 | ||| |||||| |||| || | | |||||||||| | || | | || ||| ||| Sbjct 2092 TCGAGGAACTCGCGGGAGCCATTGCCGTCCCAGATCTTGATGCCGGCCTCGCTGAG-GCT 2034 Query 147416 CCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAA 147475 | ||| ||| |||| |||||||||||| ||||| | | || | | | Sbjct 2033 -GGTGGAGGATGTGTTGCCCTCGATGAACCAGAGGAGCTCGGCGATGACGGCGCGGGTGA 1975 Query 147476 AGACCCTCTTGGTGGTCAGCAGGGGGA 147502 |||| | ||||||||| || ||||||| Sbjct 1974 AGACGCGCTTGGTGGTGAGGAGGGGGA 1948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583320400365600