Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20tucumaniae_20[genbank_20GCA_5F001680595.1_202016-07-06] 22,979 sequences; 49,676,379 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq8513 215 6e-51 >seq8513 Length=2088 Score = 215 bits (238), Expect = 6e-51 Identities = 1115/1753 (64%), Gaps = 43/1753 (2%) Strand=Plus/Plus Query 110354 GCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGC 110413 |||| | ||| || |||||||| || ||||| || || | ||||| || | ||| Sbjct 11 GCCTGCGTTCGCAGGTAGTACATGCCCGTCTTCAGGCCGAGCTTCCAGCCGGCAAAGTGC 70 Query 110414 ATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCAT--ACTTTGACTTT 110471 || | || |||| ||| || || | |||| || ||| | ||| |||| Sbjct 71 ATGCTGGTGATCTTGCCCATGGTGGGGTCCTTCATGTGGATGTTGAGGGACTGGGACT-- 128 Query 110472 GGTCAATGAAGCGCCCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTAATTTCCC 110531 | ||||||||| || || | || ||||| | || ||| | | | ||| |||| Sbjct 129 GATCAATGAAGGCACCTCGGTCGGCAGCCATCTGAACGACCTGGCGCTGCGAAATCTCCC 188 Query 110532 AAACTGTGCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAAC 110591 | || || ||||| ||||| || | ||||| | | ||| ||||||||||||| Sbjct 189 AGACGGTCTTGTAGAGGGCCTTGACCTCGGCGGGGATGTTGGGGATGTTCTGGATGGAAC 248 Query 110592 CCCCCGCCTTCACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGT 110651 | | | | || | | ||||| | | ||||| || || || | |||| Sbjct 249 CGTTCTCGGCAATGATTCGGTTTTTCATGGCATCCGACCACAGGCCCATGTCAACAAGGT 308 Query 110652 CATTGACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGA 110711 | |||| || |||||| | ||||| || |||||| | | | |||||| Sbjct 309 CCTTGAGCAGCCAGGGGTTGACGACCTGGAACTCGCCAGCGAGGACACGGCGCTGGTAGA 368 Query 110712 TGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTG 110771 |||| | ||||| || || ||||| || || || |||| ||| || | || ||| | Sbjct 369 TGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTGCCCAGGATCTGCGAAGTACTGGCAG 428 Query 110772 TTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGA 110831 | ||||| || || | || |||||||| |||| || | |||||||| | ||| || Sbjct 429 TAGGCATAGGGGCAAGCAGCAGACTGTTGCGAATGCCGTGCTCCTTGACCTGCTCCCGGA 488 Query 110832 GAACATCCCAGTCGTAGTTG--AGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCAC 110889 | |||||||| || | || || ||||| |||| ||||||| ||||| || | Sbjct 489 GGTTCTCCCAGTCCCAGAGGTCAGAA-GGCTTCACATTCC-ACATGTCGAACTGGAGAAT 546 Query 110890 CCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATT- 110948 || | || |||||||| |||| ||||| |||| ||| | | | |||| | Sbjct 547 ACCCTCAGAGGCGGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCCAGCTG 606 Query 110949 CACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCT 111008 ||| | || |||| || || || ||||| || ||||| | || | ||| Sbjct 607 CACCGAA-GCAGTGAGGGCAGCATGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTCAC 665 Query 111009 TGGCTTCATCTGAATC-AAATGCGTAGCGGCACAA-AATAAATACATCCGCGAGACCTTG 111066 || || || || ||| || | ||| || | || || |||| || ||||| || Sbjct 666 GAGCCTCGGGAGACTCGAAAGGCAT-GCG-CAGAGCAAGGAAAGCATCAGCAAGACCCTG 723 Query 111067 AACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATA 111126 ||||| | |||||| |||| ||||||||| || || || || | ||| || || Sbjct 724 GACACCAACACCAATGGGTCGGTGTCGCATGTTGCTGTTGCGAGCTTCCGTAACAGGGTA 783 Query 111127 AAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAG 111186 || ||| || | | ||| || || |||| || ||||| || || | Sbjct 784 GTGGTTCACGTCGATAATCCTGTTCAGGTTGCGAACGACAACCTGTGTGACGTCGTGCAA 843 Query 111187 TTTTTCATAATCAAAAGTGCGAGTCTCTTCAT---TGACATACTTTGGAAGGGCGATTGA 111243 || | | ||| | || || || || | ||| || || ||||| | || Sbjct 844 CTTCTGGAAGTCATA---GCAAGCATCATCGTAGTTGATGAACGAAGGCAGGGCCAGAGA 900 Query 111244 TGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAA 111303 || | ||||| ||||| |||||| | |||||| | ||| || || || | Sbjct 901 AGCAAGGTTGCAGACAGCAACCTCATCAGGGGCGCAGTACTCGATAATCTCGGTGCAGAG 960 Query 111304 GTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTT 111363 ||||| || || || |||| ||||| ||||| ||||| |||||| ||||| Sbjct 961 ATTGGAGCTACGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTT 1020 Query 111364 GTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACAT 111422 |||||||||| |||| | || ||||| ||||| | | ||| || || | ||| | | | Sbjct 1021 GTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGCGCCTCGAGGATGGCATACCAGAGCTT 1080 Query 111423 CGGCGGCTGGTACAATGGCGTTG-GCCCGT--CCCTCCGCCTCGTACTTTGTGTAGAGGG 111479 | | | || |||| ||| | || | ||| || ||| |||||| ||| || | Sbjct 1081 CTGGGCCT----TCATGGTCTTGCGACCCTTGCCCGCCTTCTCATACTTTTCGTAAAGAG 1136 Query 111480 CTTCAAACTCCTCACCCACCGC-GTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGA 111538 | || |||||||| ||| || ||||| ||||| || || || ||||| | || Sbjct 1137 CCTCGAACTCCTC-GCCATAGCAGTCGGCCAGACCGGGGCACTCGTTGGGACACATGAGG 1195 Query 111539 GACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAA 111598 | ||| | ||| | ||| || ||||||||||| || || |||||||| || | Sbjct 1196 GTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCCAGG 1255 Query 111599 AAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCC 111658 || || || | || |||| || | || ||||| || | ||||||||||| Sbjct 1256 AACAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCA 1315 Query 111659 ATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAGATCCCTTTCGACGC 111712 | || ||| |||||||| |||||||| |||| || | || || ||| | | Sbjct 1316 AAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCAGGTCGCTT--GTTG- 1372 Query 111713 CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCA 111772 ||| | || | || || || || ||| ||| || || |||||||| || | | ||| Sbjct 1373 CCACCCTGGTCGACGTACCGGGCAGTGTTGTTGAAGACACGAAGCATGGGGGTGACACCG 1432 Query 111773 TCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGC 111832 | || ||| || || || || ||| | |||| | | |||| || | Sbjct 1433 TTGGAGGTACCGTTGGTACCAGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGACGTTC 1492 Query 111833 ATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATA 111892 | || ||||| || ||| ||| ||||| ||||| | | ||||| |||| ||| Sbjct 1493 AGGCCGATACCACCCGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATA 1552 Query 111893 CCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGT 111952 || | || |||||| || || ||| |||||||| ||||| ||| || || Sbjct 1553 CCCTCAATGCTGTCCTCTTTCATGTCGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGA 1612 Query 111953 GTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACA--TACCTTGGGACATCTTGT 112010 |||||||||||||||||||| || | || || |||| | | || |||||| || Sbjct 1613 GTACCAGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAGAATTTGCT--CGACATCAGGT 1670 Query 112011 CGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGA 112070 ||| ||||||| |||| ||||| || || || |||||||| | || ||||||| Sbjct 1671 TGTAGGTCTCCAGGACACGCTCAATATCGTCACCCCAGATGCCGACAGACACACGCATGA 1730 Query 112071 ACATGTACTGTGG 112083 ||||| ||| || Sbjct 1731 TCATGTGCTGGGG 1743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627851605658400