Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20tucumaniae_20[genbank_20GCA_5F001680595.1_202016-07-06] 22,979 sequences; 49,676,379 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq8513 185 1e-41 seq3398 132 6e-26 >seq8513 Length=2088 Score = 185 bits (204), Expect = 1e-41 Identities = 1104/1753 (63%), Gaps = 43/1753 (2%) Strand=Plus/Plus Query 117828 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 117887 |||| | ||| ||||||||||| |||||||| || || |||||||| | | ||| Sbjct 11 GCCTGCGTTCGCAGGTAGTACATGCCCGTCTTCAGGCCGAGCTTCCAGCCGGCAAAGTGC 70 Query 117888 ATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGA 117947 || || | |||| | ||| || | |||| || ||| | ||||| ||| Sbjct 71 ATGCTGGTGATCTTGCCCATGGTGGGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGA 130 Query 117948 TCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCAC 118007 || |||||| || || || || ||||| | || || | | | || ||||| Sbjct 131 TCAATGAAGGCACCTCGGTCGGCAGCCATCTGAACGACCTGGCGCTGCGAAATCTCCCAG 190 Query 118008 ACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCA 118067 || ||| |||||||| ||| | || | ||||| | ||| || |||||||| | Sbjct 191 ACGGTCTTGTAGAGGGCCTTGACCTCGGCGGGGATGTTGGGGATGTTCTGGATGGA---A 247 Query 118068 CCCGCCTTGACCATGA---GATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGA 118124 || || | | |||| | | ||||| | | ||||| || || || | || Sbjct 248 CCGTTCTCGGCAATGATTCGGTTTTTCATGGCATCCGACCACAGGCCCATGTCAACAAGG 307 Query 118125 TCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAG 118184 |||| | || ||||| || ||||| || |||||| || | | | ||| Sbjct 308 TCCTTGAGCAGCCAGGGGTTGACGACCTGGAACTCGCCAGCGAGGACACGGCGCTGGTAG 367 Query 118185 ATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCT 118244 || |||| ||||| ||||| |||||||| ||||| |||| ||| || | || ||| Sbjct 368 ATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTGCCCAGGATCTGCGAAGTACTGGCA 427 Query 118245 GTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTG 118304 || ||||| || || | || || ||||| || | || | ||| | | | ||| | Sbjct 428 GTAGGCATAGGGGCAAGCAGCAGACTGTTGCGAATGCCGTGCTCCTTGACCTGCTCCCGG 487 Query 118305 AGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATA 118364 || |||||||| || | | || | | | |||||| || |||||||| ||| Sbjct 488 AGGTTCTCCCAGTCCCAGAGGTCAGAAGGCTTCACATTCCACATGTCGAACTGGAGAATA 547 Query 118365 CCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG 118424 || | || || || || |||| || || || || ||||| ||| |||| | | Sbjct 548 CCCTCAGAGGCGGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCCAGCT-G 606 Query 118425 GAGCTC-GCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTT 118483 | | || |||||| || || || || || || || || | || | | Sbjct 607 CACCGAAGCAGTGAGGGCAGCATGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTCACG 666 Query 118484 GGCCTCGTCGGAATCAAACGCGAGTCGGCACAA-AATAAATACATCCGCGAGACCTTGGA 118542 |||||| || || || | | || || | || || |||| || ||||| |||| Sbjct 667 AGCCTCGGGAGACTCGAAAGGCATGCG-CAGAGCAAGGAAAGCATCAGCAAGACCCTGGA 725 Query 118543 CACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAA 118602 |||| | ||||| || || |||| ||| || || ||||| | || || || Sbjct 726 CACCAACACCAATGGGTCGGTGTCGCATGTTGCTGTTGCGAGCTTCCGTAACAGGGTAGT 785 Query 118603 AATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCT 118662 ||| ||||||| ||| || || || |||||||| ||||| || || | || Sbjct 786 GGTTCACGTCGATAATCCTGTTCAGGTTGCGAACGACAACCTGTGTGACGTCGTGCAACT 845 Query 118663 TTTCGTAATCAAAACTGCGAGTCTCTTCAT---TGACATACTTAGGAAGGGCGATTGACG 118719 | | | | ||| | || || || || | ||| || ||| ||||| | || | Sbjct 846 TCTGGAAGTCATA---GCAAGCATCATCGTAGTTGATGAACGAAGGCAGGGCCAGAGAAG 902 Query 118720 CCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGT 118779 | || || || |||| |||||| | |||||| ||||| || ||||| | | Sbjct 903 CAAGGTTGCAGACAGCAACCTCATCAGGGGCGCAGTACTCGATAATCTCGGTGCAGAGAT 962 Query 118780 TTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGT 118839 | || || |||||||||| |||||| || || ||| ||| || ||||||| Sbjct 963 TGGAGCTACGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGT 1022 Query 118840 AAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCG 118898 | |||||| | || | || ||||| || || | || ||| || || | ||||| | || Sbjct 1023 AGAGCATGAAGGGGTTGCCGGTCTCGGTCTGCGCCTCGAGGATGGCATACCAGAGCTTCT 1082 Query 118899 GCAGCTGGCACAGTGGCGTTGG----CTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGC 118954 | || || ||| ||| || |||| |||| || |||||| ||| || || Sbjct 1083 GGGCCTT---CA-TGGTCTTGCGACCCTTGCCCGCCTTC-TCATACTTTTCGTAAAGAGC 1137 Query 118955 TTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGA 119014 || ||||| || || | || | || || || || | || || | ||| | Sbjct 1138 CTCGAACTCCTCGCCATAGCAGTCGGCCAGACCGGGGCACTCGTTGGGACACATGAGGGT 1197 Query 119015 CCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAA 119074 ||| | ||| || ||| || |||||||||||||| || || |||||||| ||| ||| Sbjct 1198 CCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCCAGGAA 1257 Query 119075 GAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCAT 119134 || || || ||| | || || | || || || |||| || | || || | Sbjct 1258 CAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAA 1317 Query 119135 GATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACGA------CC 119188 || ||| |||||||| || || ||||| | || | | || | | || || Sbjct 1318 GACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACC---AGGTCGCTTGTTGCC 1374 Query 119189 AGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATC 119248 | |||||| || |||| |||||| ||| || ||||||||||| || ||| ||| | Sbjct 1375 ACCCTGGTCGACGTACCGGGCAGTGTTGTTGAAGACACGAAGCATGGGGGTGACACCGTT 1434 Query 119249 GGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCGTGGATGTGC 119306 ||| || || || || ||| || ||| | | |||| | || ||||| || | Sbjct 1435 GGAGGTACCGTTGGTACCAGCGATGTAAGAGCC--AGTGGCACGGATTCGGTGGACGTTC 1492 Query 119307 ATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATC 119366 | || ||||| || ||| ||| ||||| || || | ||||| | | || || Sbjct 1493 AGGCCGATACCACCCGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATA 1552 Query 119367 CCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGT 119426 || || || ||| | || | ||| |||||||| |||| |||||| ||| Sbjct 1553 CCCTCAATGCTGTCCTCTTTCATGTCGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGA 1612 Query 119427 GTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACA--TACCTTGGGACATCTTGT 119484 |||||||| |||||||| || || | || ||| |||| | | || |||||| || Sbjct 1613 GTACCAGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAGAATTTGCT--CGACATCAGGT 1670 Query 119485 CGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAA 119544 ||||||||||| ||| ||| || || || || |||| || || ||||| | Sbjct 1671 TGTAGGTCTCCAGGACACGCTCAATATCGTCACCCCAGATGCCGACAGACACACGCATGA 1730 Query 119545 ACATGTATTGGGG 119557 ||||| ||||| Sbjct 1731 TCATGTGCTGGGG 1743 >seq3398 Length=5185 Score = 132 bits (146), Expect = 6e-26 Identities = 527/815 (65%), Gaps = 21/815 (3%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| || || ||||||||||||||||| ||||| || | | | ||| |||||||| Sbjct 989 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTCCATG 1048 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGACG 129846 || || || ||||| | | || | | | || | | | | |||||| || Sbjct 1049 AAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTGCCGAGGGCGAC-GAGGAGGCG 1107 Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906 || | |||| |||| ||||||| ||| |||| |||||| |||| ||| || Sbjct 1108 GTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCGGCGTTCATGCCGAGCAGGGCGCA 1167 Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966 ||||| || || | |||| ||| ||||||| || || || | |||| | || Sbjct 1168 GGGGAGGGCCTCGGTCAGGAACTCCTGCTCAATGGTGACGGCATCGGTGATGATGTCCTG 1227 Query 129967 AATGGTCTCCGTGC---CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTC 130023 ||| || | ||| || | | ||| | | | || ||| || | |||| || Sbjct 1228 GATGACCTGCTTGCTGGCACGGCCCTTGAGGTGGGAGTGGAGGAGG--CATG-CAAAGTC 1284 Query 130024 CTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAG 130083 ||| |||||||||||||| |||||||| || || || ||| ||| || |||||||| Sbjct 1285 GGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCAGGCATGAG 1344 Query 130084 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 130143 || |||||||| | |||||| || | ||| | || ||||||||| ||||| || Sbjct 1345 GCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTCGAC 1404 Query 130144 ACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAAACCACTTCA 130202 || || || | |||||||| ||||||||| || | |||| | | ||| | Sbjct 1405 GGCAGCAAAAGCGACGAGACGCTGAGCAAAGGA-CGAGTTCTTGTCCTGGATCCATCGGA 1463 Query 130203 TCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCT 130262 | ||||| | ||||| || ||| || |||| ||||| || || | ||||| | Sbjct 1464 TGGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTGAAGAGGTAGG 1523 Query 130263 TCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGA 130322 | || | || || |||||||| | || ||||| || || || ||| |||| Sbjct 1524 TTCGTTGAGCAGGCTCCTTGATGTAGGTGTCAATGAGGAGCGAGTAGGTCTCGGAGTGGA 1583 Query 130323 CCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCA 130381 | | ||| || | ||| | ||||||| | || || ||| ||||| ||||| Sbjct 1584 TGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGGGCCTCGGGGATCTGGACCTC- 1641 Query 130382 TCTGCAAAATTGTTATTGATA---TTCTCAAAAACAATTCCATCGGACCCAGCAAAAAAC 130438 | || ||| | | || | ||||| || || || || || |||| || || Sbjct 1642 GCCGCTGAATCG--CTCGACAAGGTTCTCGTTGACGATGCCGTCAGATGCAGCGAAGAAG 1699 Query 130439 GCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCA 130495 || ||||| | | ||| ||| || | | ||| || | |||||||||| Sbjct 1700 GCGAGGATGTGGGAGACGAAGAACTGCTCGTCGGCAGTCAGGCGGTTGTTCCAGTCGTGG 1759 Query 130496 AGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 |||||||| || | ||| | |||||| |||||||| Sbjct 1760 AGATCCTTGGATAAATCAATCTCCTCGGCAGTCCA 1794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618257562219240