Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20tucumaniae_20[genbank_20GCA_5F001680595.1_202016-07-06] 22,979 sequences; 49,676,379 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq5378 96.9 3e-15 >seq5378 Length=3710 Score = 96.9 bits (106), Expect = 3e-15 Identities = 159/226 (70%), Gaps = 4/226 (2%) Strand=Plus/Plus Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695 |||||||||||| || ||||| | |||||||| | || || |||||||||||||| || Sbjct 2402 CTGCCAGCTCTACCAGCGATCCTGCGACATGGGTCTCGGCGTCCCGTTCAACATTGCCAG 2461 Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGT 34755 ||||| ||||| || ||||||| || || ||| | ||||| ||| || ||| Sbjct 2462 CTACGCACTGCTGACACACATGATGGCGCACGTCTGCGAATTGGTGCCT-GGCAGC-CTC 2519 Query 34756 GCATACGT--TGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGGATCCAG 34813 | |||| |||| |||||||| ||||||| ||||| | || ||| | ||| Sbjct 2520 ACTCACGTCATGGGCGATGCGCACGTCTACCTCGACCACGTGGATGCTCTCAACACGCAG 2579 Query 34814 CTGCAACGAGAGCCCCGACCGTTCCCCCAGCTCAAAATTATTCGAG 34859 || | || |||||||| || || |||| | |||| ||||| Sbjct 2580 CTTGAGCGCGAGCCCCGTGACTTTCCAGAGCTGGAGATTACTCGAG 2625 Score = 96.9 bits (106), Expect = 3e-15 Identities = 159/226 (70%), Gaps = 4/226 (2%) Strand=Plus/Minus Query 6486 CTCGAATAATTTTGAGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCC 6545 ||||| |||| | |||| || || |||||||| || | ||||| | ||| Sbjct 2625 CTCGAGTAATCTCCAGCTCTGGAAAGTCACGGGGCTCGCGCTCAAGCTGCGTGTTGAGAG 2566 Query 6546 GCTCGATGTGGTTCAGGTAGATATGCGCATCCCCCA--ACGTATGCACCAGCTCCCCAGG 6603 || | ||||| ||||||| |||||||| |||| |||| | ||| || ||| Sbjct 2565 CATCCACGTGGTCGAGGTAGACGTGCGCATCGCCCATGACGTGAGTGAG-GCTGCC-AGG 2508 Query 6604 AACCAACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAA 6663 ||||| | ||| || || ||||||| || ||||| ||||| || ||||||||||| Sbjct 2507 CACCAATTCGCAGACGTGCGCCATCATGTGTGTCAGCAGTGCGTAGCTGGCAATGTTGAA 2448 Query 6664 CGGCACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAG 6709 ||| || || | |||||||| | ||||| || |||||||||||| Sbjct 2447 CGGGACGCCGAGACCCATGTCGCAGGATCGCTGGTAGAGCTGGCAG 2402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448133642228880