Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20tucumaniae_20[genbank_20GCA_5F001680725.1_202016-07-06]
54,001 sequences; 49,886,306 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq14164 123 3e-23
>seq14164
Length=1493
Score = 123 bits (136), Expect = 3e-23
Identities = 217/312 (70%), Gaps = 7/312 (2%)
Strand=Plus/Plus
Query 145545 CATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCCGCCCT 145604
||||| ||| | || | | ||| |||| ||||||| | |||| ||||||||| |
Sbjct 1016 CATCTTCATTGCAATAGTCTTGTGAGGGTCATAGCCCTTGATAACAAAATCCTCCGCCTT 1075
Query 145605 GAAGTCATCTATGTCCTCCACCCGCCTCAGGA----TCCTGAGCCTGGGAAAGGGCCGGG 145660
| | || ||| | ||| ||| ||| || || ||| |||||| ||||
Sbjct 1076 CCACCCGTCGATG-CTTCCGCCCTTCTCTCGAGTAATCTCCAGCTCTGGAAAGTCACGGG 1134
Query 145661 GGCTCCTGGTCA-GCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCC 145719
| ||| | ||| |||| || || | |||||||||| ||||||||||||||| ||
Sbjct 1135 G-CTCGCGCTCAAGCTGCGTGTTGAGAGCATCCACGTGGTCGAGGTAGACGTGCGCATCG 1193
Query 145720 CCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTC 145779
|||| |||||| ||| | || ||| | | | || ||| || | ||||| |||
Sbjct 1194 CCCATGACGTGAGTGAGGCTGCCAGGCACCAATTCGCAGACGTGCGCCATCATGTGTGTC 1253
Query 145780 AGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGG 145839
||||| | ||||||||| |||||||| || || || || |||||||| | || ||||||
Sbjct 1254 AGCAGTGCGTAGCTGGCAATGTTGAACGGGACGCCGAGACCCATGTCGCAGGATCGCTGG 1313
Query 145840 TACAGCTGGCAG 145851
|| |||||||||
Sbjct 1314 TAGAGCTGGCAG 1325
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589678490784040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |