Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20tucumaniae_20[genbank_20GCA_5F001680725.1_202016-07-06] 54,001 sequences; 49,886,306 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq12608 84.2 2e-11 >seq12608 Length=1983 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTG 48582 |||||| || |||||| || |||||||| || | || || |||| |||||||| Sbjct 823 ATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGACCGTCTTCCAGCTG 764 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 |||||| | | || | |||||||| || || | | ||||||||| ||| || Sbjct 763 CTTACCAGCAAAGATAAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGAATCTT 704 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 ||| | | ||||||||| | |||||| ||| | || ||||| || || || Sbjct 703 GGACTTCACGTTGTCAATGGTATCGCTCGACTCCACCTCCAGAGTGATGGTCTTTCCAGT 644 Query 48703 GAGAGTTTTCACAAAAATCTGCAT 48726 |||||| || ||||| |||||||| Sbjct 643 GAGAGTCTTGACAAAGATCTGCAT 620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420973958920001