Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20tucumaniae_20[genbank_20GCA_5F001680725.1_202016-07-06] 54,001 sequences; 49,886,306 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq12608 170 4e-37 seq9934 165 1e-35 seq19757 136 7e-27 seq28553 132 9e-26 seq17170 125 1e-23 seq17333 91.5 3e-13 >seq12608 Length=1983 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| || || | |||| ||| || || ||||| || |||||||| || ||| | Sbjct 618 CCACCGCGCAGACGAAGAACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTG 559 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| ||||| || ||||||| ||||| || || ||| Sbjct 558 AGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGTCGCTGTTGATCAGGAGGA 499 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||||||||| || ||||| | || || || |||||||| | ||||| || Sbjct 498 ATGCCTTCCTTGTCCTGGATCTTCGATTTCACATTGTCAATGGTGTCGGACGATTCCACC 439 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| ||||| ||||||||||||||||| |||||||| Sbjct 438 TCAAGGGTGATGGTCTTTCCGGTGAGGGTCTTGACGAAGATCTGCAT 392 Score = 143 bits (158), Expect = 5e-29 Identities = 162/217 (75%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | || | ||| || || ||||| || || ||||| || |||| | Sbjct 390 CCACCACGGAGGCGGAGGACGAGGTGGAGTGTTGACTCCTTCTGAATGTTGTAGTCGGCG 331 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| |||||||| || || | || ||||| || ||| Sbjct 330 AGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGAGGA 271 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||| ||||| ||||| | ||||||| ||||| ||||| | || || || Sbjct 270 ATACCCTCCTTATCTTGGATCTTCGACTTGACGTTGTCGATCGTGTCGGAAGACTCCACC 211 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451 || | |||||| || || || |||||||||||||||| Sbjct 210 TCGAGGGTGATAGTCTTACCAGTGAGGGTCTTGACGA 174 >seq9934 Length=2663 Score = 165 bits (182), Expect = 1e-35 Identities = 562/865 (65%), Gaps = 23/865 (3%) Strand=Plus/Plus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 || ||| || ||||||||||| || || || |||||||||||||| |||||| | Sbjct 70 CAGGACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACC 129 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 |||||| ||| |||||||||||| |||||||| ||| | ||| || || Sbjct 130 GAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTGCC 189 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 ||| || || | |||||| || ||||||||||||||||| |||| ||||| | ||| Sbjct 190 GAGGGCGACGAGGAGGCGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCGGCGTT 249 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174 |||||| | || | |||||||| ||| ||| | ||| |||| || ||| ||| || Sbjct 250 CATGCCGAGCAGGGCGCAGGGGAGGGCCTCGGTCAGGAACTCCTGCTCAATGGTGACGGC 309 Query 10175 TTCCTCGACGATGCTCT---TTACC-ACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAAT 10230 || || |||| || | ||| | | || || || || ||| | || | Sbjct 310 ATCGGTGATGATGTCCTGGATGACCTGCTTGCTGGCACGGC----CCTTGAGGTGGGAGT 365 Query 10231 ACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACA 10290 ||||| | |||| | ||| || |||||||| || ||||| ||||||||| | Sbjct 366 GGAGGAGGCATGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAA 425 Query 10291 AACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGG 10350 | ||| || |||||||| || || || |||||||| |||| | || | ||| Sbjct 426 AGGTCAGGCCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGC 485 Query 10351 AGAACAGAAGACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGGA-GCGGTC- 10408 ||| | | |||||| ||| | | |||||||| |||| || ||||| | | || Sbjct 486 TGAAGAAGATACCCTCGACGGCAGCAAAAGCGACGAGACGCTGAGCAAAGGACGAGTTCT 545 Query 10409 -GCGCGAAAAGTATTTCGAGGCCCACGCTGCCTTCTTTCCCACGGCAGGGATCGTCTCGA 10467 | | | || |||||| | |||||||| | | | ||||| ||||| | Sbjct 546 TGTCCTGGATCCATCGGATGGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAA 605 Query 10468 TAGCCTCGAAGAGCTTGTTACGCTCGGTCTCGTCCTCAATAAGAGCATCAAGGAGCAGGG 10527 | || | |||||| | | | || | | |||| || | |||| ||| || | Sbjct 606 TGGCGTTGAAGAGGTAGGTTCGTTGAGCAGGCTCCTTGATGTAGGTGTCAATGAGGAGCG 665 Query 10528 AGTATTGCTCGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAA-CATACGTGCC 10586 |||| |||| ||||| | |||| | |||| | ||||||| ||| || ||| Sbjct 666 AGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAT-CGGGCC 724 Query 10587 GAGGGGTCCGTGACTTCCTCGGCAAAGTTGTTGTTCAGGTTCTCCATCACCATGCCATC- 10645 |||| | ||| || || || | | |||||||| | || ||||| || Sbjct 725 TCGGGGATCTGGACCTCGCCGCTGAATCGCTCGACAAGGTTCTCGTTGACGATGCCGTCA 784 Query 10646 GCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGTTCA---- 10701 | || | || |||||| |||||||||| || |||| |||| || | ||| Sbjct 785 GATG-CAGCGAAGAAGGCGAGGATGTGGGAGACGAAGAACTGCTCGTCGGCAGTCAGGCG 843 Query 10702 GTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAGAAAG 10761 ||| || |||||| | ||||| | | | | |||||| | |||||||||| Sbjct 844 GTTGTT----CCAGTCGTGGAGATCCTTGGATAAATCAATCTCCTCGGCAGTCCAGAAAG 899 Query 10762 TGGCAACGGCCTTCTTGTACATCTG 10786 ||| ||||||||||||||||||| Sbjct 900 AGGCCTCGGCCTTCTTGTACATCTG 924 >seq19757 Length=865 Score = 136 bits (150), Expect = 7e-27 Identities = 125/158 (79%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 ||||| || | |||||| || || || ||||||| || |||||||| || ||||| ||| Sbjct 16 CCATCCTCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCGGGGGGGATGCCCTCC 75 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 ||||| || ||||| | ||||||| ||||||||||| | || || || || | |||| Sbjct 76 TTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTG 135 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || ||||||||||||||||| || |||||||| Sbjct 136 ATTGTCTTCCCCGTGAGGGTCTTGACAAAGATCTGCAT 173 >seq28553 Length=603 Score = 132 bits (146), Expect = 9e-26 Identities = 133/173 (77%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 68265 GTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCG 68324 || ||||| || |||||||| ||||||||||| || | ||||| || | |||||| ||| Sbjct 601 GTCGACTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCG 542 Query 68325 GCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTG 68384 ||||| || || | || |||||||| || ||||| |||||||| |||||||| | |||| Sbjct 541 GCGAAAATCAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTCGACTTG 482 Query 68385 ACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437 || |||||||| || | || || || || | ||| ||||| || ||||| Sbjct 481 ACATTGTCGATGGTATCCGAGGACTCGACCTCGAGGGTAATGGTCTTGCCCGT 429 >seq17170 Length=1518 Score = 125 bits (138), Expect = 1e-23 Identities = 344/516 (67%), Gaps = 32/516 (6%) Strand=Plus/Plus Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 |||||||||||||||| | ||||||| ||||||||||||| || || || |||||| Sbjct 978 CGCCACTGGATGTACTCGGAGGGGGTCTTGTCCAGGTGGTTATCGATGTGAGCGAAAGCG 1037 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACA-CAGAGCCCCGAGTCGG 225099 ||||| | ||| || || || ||||| |||| | | | | || || || Sbjct 1038 TGCTGCTTGATGTAGGCGATACGGATGTTCTCGTGCTGGTAGATCTCACCCTCGGTGGGG 1097 Query 225100 TTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAAT 225159 || | ||| || |||||||| |||||||| || | ||| || ||||| ||||| || || Sbjct 1098 ATGAG-CTCACCAGTGAGGACGTTGATGAGGGTGGACTTTCCGGCACCGTTGGGACCGAT 1156 Query 225160 CACGCCAATCCGGGATGACATTGCAACCTG---CGAGTTCACGTTG--CTGAAGATCTCA 225214 ||| |||| ||||| || | ||| ||| | || || |||| | | | Sbjct 1157 GACGGCAATACGGGAGCCCAGGGAGCACTGGAAGGAGATGTCGGTGATCTGAGGCTTGGA 1216 Query 225215 GGGCCAGTTTGGTAAGCAAAGGCCA------CGCCACGCAGCTTCATGATGGCACGGTCC 225268 || | | |||| |||| || | ||||||| |||||| | || Sbjct 1217 GGTACCG--GGGTACTGGAAGGACATCTTGGTGGCACGCAG------GATGGCCTTGGCC 1268 Query 225269 TTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTCC 225328 |||| | | ||||| ||||| |||||||| ||||| ||| | || | | | | Sbjct 1269 TTGGTCTTGACTCCCTCGAGGAAACCGGGCTCAGGGAAGGAGAACTCGATCTCGGAGGCA 1328 Query 225329 TTCAGGTCGTAGTAAGAT---GCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTT 225385 || |||||||||||| |||| ||| ||| || |||||||||| |||||| Sbjct 1329 CCGAGCTCGTAGTAAGATCGGGCAG--AGGGGACGCGCTG-GACGAAAGCAGCCAGGTTA 1385 Query 225386 CCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAAT-TGCCGAGCACACTGC 225444 || || | ||||||||| | |||||| || ||||| ||| | ||| || Sbjct 1386 CCCTTGTAGCGCTTGAGCTTGAAG---CGCTCGTAGTGGACAATGTGCTG-GCAGACGTT 1441 Query 225445 GTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGA 225480 ||| |||||||||||||||||||| || |||||||| Sbjct 1442 GTCGAGGAAGCCAGAGTCGTGGGAGACGATGATGGA 1477 >seq17333 Length=1598 Score = 91.5 bits (100), Expect = 3e-13 Identities = 170/247 (69%), Gaps = 2/247 (1%) Strand=Plus/Minus Query 225751 GGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTACACCGTCCGGAGCT-GAG 225809 |||||| || | | ||| | ||| | |||||| || ||| | || ||| || || | Sbjct 1285 GGTCATCTCAGTGTCAGCAGAGTCCAGGTCGTGCTCGACGAAGACGGTCTTGACCTCGCT 1226 Query 225810 AAGCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGC 225869 || | |||||| ||||| | ||| | || || ||||| | || || ||||| Sbjct 1225 CTGCTT-GGGGAAACCCTCAACCTGCTCGTTGTTGATGGCACGCATGAGAGTGGACTTGC 1167 Query 225870 CCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGTTGAGGCGCGTGG 225929 | | |||||||||||| || ||||| | | || ||||||| | |||| | || Sbjct 1166 CGGAACCGTTGGGACCGCAAAGACCGTAGCGCTGGCCACGCTTGAGGCGGAGGTGAGTCT 1107 Query 225930 AGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGCACAGGTCCTCAC 225989 ||| || || |||||| |||| |||||||| ||||| || | ||| || ||||||| Sbjct 1106 GGTTGAGCAGAATCTTGGCACCGTAGGCAAGAGAGAAAGTACAGTTGCAAAGATCCTCAC 1047 Query 225990 CCTCCTC 225996 ||||||| Sbjct 1046 CCTCCTC 1040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921000293359720