Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20tucumaniae_20[genbank_20GCA_5F001680725.1_202016-07-06] 54,001 sequences; 49,886,306 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq13449 489 3e-133 seq9934 387 3e-102 >seq13449 Length=2090 Score = 489 bits (542), Expect = 3e-133 Identities = 1161/1733 (67%), Gaps = 41/1733 (2%) Strand=Plus/Plus Query 243874 GAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGAG 243933 || ||||||||||||| ||| || | ||||| | || || || ||||| ||| | Sbjct 81 GATGTTGAGGGACTGGGACTGATCAATGAAGGCACCTCGGTCGGCAGCCATC-TGA--AC 137 Query 243934 GTCCTT---CTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAA 243990 | ||| ||| || ||||| | | |||||||||| || ||||| | |||||| Sbjct 138 GACCTGGCGCTGCGAAATCTCCCAGACGGTCTTGTAGAGGGCCTTGACCTCGGCGGGGAT 197 Query 243991 CCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTT 244050 ||||||||| | || || || | | | |||| || | |||| ||| Sbjct 198 GTTGGGGATGTTCTGGATGGAACCGTTCTCGGCAATGATTCGGTTTTTCATGGCATCCGA 257 Query 244051 CCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCACCACCTGAAACTCTCC 244110 ||||||||||| | | || ||| || ||| ||| || ||||| ||||| || Sbjct 258 CCACAGGCCCATGTCAACAAGGTCCTTGAGCAGCCAGGGGTTGACGACCTGGAACTCGCC 317 Query 244111 CGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCC 244170 | || || ||||||||||||| |||| | || ||||||| || ||| ||||||| Sbjct 318 AGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTGCC 377 Query 244171 CAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCC 244230 ||| ||||||| || || ||||| ||||| || | | |||||||||||| | | ||| Sbjct 378 CAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCAAGCAGCAGACTGTTGCGAATGCC 437 Query 244231 GTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGCG 244290 |||| || || | | ||| | | ||||||||| | | | || ||| | || | Sbjct 438 GTGCTCCTTGACCTGCTCCCGGAGGTTCTCCCAGTCCCAGAGGTCAGA-AGG-CTTCACA 495 Query 244291 TTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGT 244350 || ||||||||| ||||| || | |||| | |||| ||||| | |||| Sbjct 496 TT-------CCACATGTCGAACTGGAGAATACCCTCAGAGGCGGGAGAGCCCTTGAAGGT 548 Query 244351 CGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGCTCTCGTCGAGGGCGGCGTAGTAGA 244409 | ||||||||| || || |||||||| || | || |||||| || | ||||| Sbjct 549 GGAGTAGGGACCCTCCTCCTTGGCCAGCTGCACCGAAGCAGT-GAGGGCAGCATGGTAGA 607 Query 244410 TGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCCA 244469 |||||||||||||| |||||| | || || |||| | | ||| || |||| || Sbjct 608 TGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGAGACTCGAAAGGCATGCGCA 667 Query 244470 TCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGT 244529 | ||| | || || || ||||| || || | || ||||||| ||||||| ||| Sbjct 668 GAGCAAGGAAAGCATCAGCAAGACCCTGGACACCAACACCAATGGGTCGGTGTCGCATGT 727 Query 244530 TGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGC 244589 || | ||||| | || ||||| ||| ||||||| | | |||| ||||||| Sbjct 728 TGCTGTTGCGAGCTTCCGTAACAGGGTAGTGGTTCACGTCGATAATCCTGTTCAGGTTGC 787 Query 244590 GGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGG 244649 | || | | ||||||| || | ||| ||||| || | | | ||| ||| Sbjct 788 GAACGACAACCTGTGTGACGTCGTGCAACTTCTGGAAGTCATA---GCAAGCATCATCGT 844 Query 244650 CGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCT 244709 | || ||| || || | ||||| | || ||||||||||| || |||| Sbjct 845 AGTTGATGA-----ACGAAGGC----AGGGCCAGAGAAGCAAGGTTGCAGACAGCAACCT 895 Query 244710 CCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCA 244769 | || | | | ||||| || ||||||||||||||| || || ||||||||||| Sbjct 896 CATCAGGGGCGCAGTACTCGATAATCTCGGTGCAGAGATTGGAGCTACGGATGGTGCCCA 955 Query 244770 GGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGG 244829 ||| || || ||| |||| ||||||| ||||||||||||||||||||| |||| Sbjct 956 GGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCGG 1015 Query 244830 TCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAG 244889 ||||| ||| || |||||| | | |||||| | | ||||| | ||| ||||| Sbjct 1016 TCTCGGTCTGCGCCTCGAGGATGGCATACCAGAGCTTCTGGGCCTTCATGGTCTTGCGAC 1075 Query 244890 CCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGT 244949 |||||||| | ||| || ||| || ||||||||||| ||| || ||| Sbjct 1076 CCTTGCCCGCCTTCTCATACTTTTCGTAAAGAGCCTCGAACTCCTCGCCATAGCAGTCGG 1135 Query 244950 CTAGGCCGGGGCACGACGCCGGG-CACATGAGACTCCACTCGCCGCCGTCCTTGACCCTC 245008 | || ||||||||| || ||| |||||||| |||| || ||| | || ||| | | Sbjct 1136 CCAGACCGGGGCAC-TCGTTGGGACACATGAGGGTCCAGTCACCGTTCTTCTCGACACGC 1194 Query 245009 TGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCC 245068 | ||||||||| ||||| |||||||| ||| |||| ||||| | || | ||| ||| Sbjct 1195 TTCATGAAGAGATCGGGAATCCAGAGAGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCC 1254 Query 245069 GAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATG 245128 ||| |||||| | ||| || | || |||||||| || ||||||||||||| | | Sbjct 1255 TTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGG 1314 Query 245129 TAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCG-C 245187 |||| || | ||| || || ||||||||||| |||||||| || || | || | Sbjct 1315 TAGATGGCAAAGGCACCAGGTCGCTTGTTGCCACCCTGGTCGACGTACCGGGC-AGTGTT 1373 Query 245188 GTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTA 245247 |||||||| || || | || | ||||| ||| |||||||| || |||||| Sbjct 1374 GTTGAAGACACGAAGCATGGGGGTGACACCGTTGGAGGTACCGTTGGTACCAGCGATGTA 1433 Query 245248 GGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGAT 245307 | ||| || | | || | || | || ||| | || || || ||||||||| Sbjct 1434 AGAGCCAGTGGCACGGATTCGGTGGACGTTCAGGCCGATACCACCCGCCATCTTGGAGAT 1493 Query 245308 GAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAG 245367 | ||| ||| |||||| || || || ||||| ||||||||| ||||||| || Sbjct 1494 CATGGCACAGGTCTTGAGAGTATCATAAATACCCTCAATGCTGTCCTCTTTCATGTCGAC 1553 Query 245368 CAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGC 245427 ||| ||||| ||||||||||| |||| ||| | | | ||||| || |||||| ||| Sbjct 1554 CAGGAAGCATGAGGACAGCTGAGGCTGGGGAGTACCAGCATTGAAGAGGGTGGGGGAGGC 1613 Query 245428 GTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCTGGAGCAGAGCGTCGATGTTGTC 245487 ||||| ||| | |||||| | | ||| |||| || | | || || | ||| Sbjct 1614 ATGGGTGAAGAATTTGCTCGACATCAGGTTGTAGGTCTCCAGGACACGCTCAATATCGTC 1673 Query 245488 GCCGTGGAT-CTGCAGGGCGCACCTCATGAGGGTGTGCTGGGG-CG-TC-TCGATGGGTC 245543 || ||| | | | | || | ||||| |||||||||| || || | || | Sbjct 1674 ACCCCAGATGCCGACAGACACA-CGCATGATCATGTGCTGGGGACGCTCAACAATCTTGC 1732 Query 245544 CCTCGGGTCCCTTGAGCATGTAGGAGCGCTCGAGCGTCTTGAACCCAAAGTAC 245596 | || |||||| | |||||| ||||| || |||||||| ||||||||| Sbjct 1733 CATC---AATCTTGAGGAGGTAGGATCGCTCAAGAGTCTTGAAGCCAAAGTAC 1782 >seq9934 Length=2663 Score = 387 bits (428), Expect = 3e-102 Identities = 612/860 (71%), Gaps = 28/860 (3%) Strand=Plus/Minus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || ||| |||||| |||||||||||||| | Sbjct 930 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAGATTGATTTA 871 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCA-----CTGTCTGAGAACGAAAAGTTTTTCCTCA 42414 ||||||| || |||| | || ||| ||| |||| |||| ||| || Sbjct 870 TCCAAGGATCTCCACGACTGGAA--CAACCGCCTGACTGCCGACGAGCAGTTCTTCGTCT 813 Query 42415 AAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCA 42474 |||| || ||||||||||| || ||||||||||| ||||| |||||||| | | Sbjct 812 CCCACATCCTCGCCTTCTTCGCTGCATCTGACGGCATCGTCAACGAGAACCTTGTCGAGC 753 Query 42475 GGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCA 42534 | |||| ||||| ||| | ||||| || |||||||||||||||||||| | Sbjct 752 GATTCAGCGGCGAGGTCCAGATCCCCGAGGCCCGATGCTTCTACGGCTTCCAGATCATGA 693 Query 42535 TAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATC 42591 | |||||| | ||||| ||| ||| | || |||| |||| |||||| ||| | Sbjct 692 TGGAGAACATCCACTCCGAGACCTACTC---GCTCCTCATTGACACCTACATCAAGGAGC 636 Query 42592 CCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGG 42651 | | | || | | || ||||| ||||| ||||| || ||||||||| ||||||| Sbjct 635 CTGCTCAACGAACCTACCTCTTCAACGCCATTGAGACCATCCCCTGCATCCGCAAGAAGG 576 Query 42652 CGGACTGGGCGCTCAACTGGATCGAGAGTCCCG-ACGCAACGTTCGGCGAGAGGCTGGTA 42710 | |||||||| || |||||| || | | | || | | || | || | || || Sbjct 575 CCGACTGGGCCATCCGATGGATCCAG-GACAAGAACTCGTCCTTTGCTCAGCGTCTCGTC 517 Query 42711 GCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTC 42770 || ||| | ||||||||||| ||||||||| || ||||| |||||||||||||||||| Sbjct 516 GCTTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCTC 457 Query 42771 AAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGA 42829 ||| || || || ||||| || || ||||| || ||||| |||||| | ||||| Sbjct 456 AAGAAGCGTGGCCTC-ATGCCTGGCCTGACCTTTTCCAACGAGCTCATCTCTCGTGACGA 398 Query 42830 GGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTC-AGGCACAAGCCCT 42888 ||| || || | |||||||| |||||||| ||| ||||||| ||| | ||| Sbjct 397 GGGTCTTCACACCGACTTTGCATGCCTCCTCCACTC---CCACCTCAAGGGCCGTGCCAG 341 Query 42889 CGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCA 42948 | ||| || ||| || ||||||||| || ||||| || ||| |||||||||| | Sbjct 340 C-AAGCAGGTCATCCAGGACATCATCACCGATGCCGTCACCATTGAGCAGGAGTTCCTGA 282 Query 42949 CGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCC 43008 | || | || ||| ||||| ||||||||||| |||||||||| |||||||| Sbjct 281 CCGAGGCCCTCCCCTGCGCCCTGCTCGGCATGAACGCCGACCTCATGAAGCAGTACATCG 222 Query 43009 AGTACGTCGCCGACCATCTCCT-GT-GCCAGATGGGTCTC-AGCCGCCTCTACAACACGC 43065 ||| ||||||||||| ||||| || ||| | || | || | ||||||| | Sbjct 221 AGTTCGTCGCCGACCGCCTCCTCGTCGCC--CTCGGCAACGAGAAG-GTCTACAAGGCCA 165 Query 43066 CGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGA 43125 | |||||||||||| |||||||||||||| | | |||||||||||||| ||||||| Sbjct 164 CCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGA 105 Query 43126 AGCGCGTCGCCGACTACCAG 43145 |||| |||| ||||||||| Sbjct 104 AGCGTGTCGGTGACTACCAG 85 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 943701759235760