Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20tucumaniae_20[genbank_20GCA_5F001680725.1_202016-07-06] 54,001 sequences; 49,886,306 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq13449 331 9e-86 >seq13449 Length=2090 Score = 331 bits (366), Expect = 9e-86 Identities = 1087/1674 (65%), Gaps = 48/1674 (3%) Strand=Plus/Minus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | ||||||| |||||| ||||| ||| || |||||||||||||| ||||||| | Sbjct 1787 TACCAGTACTTTGGCTTCAAGACTCTTGAGCGATCCTACCTCCTCAAGATTGATGGCAAG 1728 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || ||||| || || || || | ||||| || | |||| || || |||| Sbjct 1727 ATTGTTGAGCGTCCCCAGCACATGATCATGCGTGTGTCTGTCGGCATCTGGGGTGACGAT 1668 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACC 93897 || | ||| || | | | || ||| | ||| | ||| ||| || Sbjct 1667 ATTGAGCGTGTCCTGGAGACCTACAACCTGATGTCGAGCAAATTCTTCACCCATGCCTCC 1608 Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT-GAC 93956 || ||||| ||||| || || || || ||| ||| |||| || || |||||| | ||| Sbjct 1607 CCCACCCTCTTCAATGCTGGTACTCCCCAGCCTCAGCTGTCCTCATGCTTCCTGGTCGAC 1548 Query 93957 GAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTC 94016 | || | ||| ||| || |||| || | |||||| |||||| | ||||| Sbjct 1547 -ATGAAAGAGGACAGCATTGAGGGTATTTATGATACTCTCAAGACCTGTGCCATGATCTC 1489 Query 94017 AAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACAT 94076 || ||||| || ||||| | | |||||| | ||||||| || || ||||| Sbjct 1488 CAAGATGGCGGGTGGTATCGGCCTGAACGTCCACCGAATCCGTGCCACTGGCTCTTACAT 1429 Query 94077 CCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGC 94136 | |||||||| || ||||||||||| || ||| ||||| || |||||||||||| | Sbjct 1428 CGCTGGTACCAACGGTACCTCCAACGGTGTCACCCCCATGCTTCGTGTCTTCAACAACAC 1369 Query 94137 GGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGA 94196 || || ||||| ||||||||||| | | | ||| | || || |||| || || Sbjct 1368 TGCCCGGTACGTCGACCAGGGTGGCAACAAGCGACCTGGTGCCTTTGCCATCTACCTTGA 1309 Query 94197 GCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCT 94256 |||||||||||| || || | ||| | |||||||| |||||||||||||| || Sbjct 1308 GCCCTGGCACGCAGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGA 1249 Query 94257 GGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGT 94316 || | ||| | ||||| ||| ||||||||| | || || || || ||||| || || Sbjct 1248 GGTCCGCGCCCGCGACCTGTTCCTGGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGT 1189 Query 94317 CGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGT 94376 |||||| ||| | ||||| || | |||||||| || || ||||| ||| ||||| Sbjct 1188 CGAGAAGAACGGTGACTGGACCCTCATGTGTCCCAACGAGTGCCCCGGTCTGGCCGACTG 1129 Query 94377 TTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCA---------GGGCAA 94427 | ||| || || || | |||| ||||||| | | |||||| Sbjct 1128 CTATGG---------CGAGGAGTTCGAGGCTCTTTACGAAAAGTATGAGAAGGCGGGCAA 1078 Query 94428 GGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGA 94487 || | ||| ||| | || |||||| ||| || ||| | || | ||| || Sbjct 1077 GGGTCGCAAGACCATGAAGGCCCAGAAGCTCTGGTATGCCATCCTCGAGGCGCAGACCGA 1018 Query 94488 GACGGGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGC 94546 ||| || | |||| ||| | | |||||| | ||| |||| |||| ||||||| || Sbjct 1017 GACCGGCAACCCCTTCATGCTCTACAAGGACCACTG-CAACCGCAAGAGCAACCAGAAGA 959 Query 94547 ACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGG 94606 |||| || ||| ||||| ||||| |||||||||||| ||||||| | || | Sbjct 958 ACCTGGGCACCATCCGTAGCTCCAATCTCTGCACCGAGATTATCGAGTACTGCGCCCCTG 899 Query 94607 ACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCT 94666 | ||| ||||||| || ||||| | || | |||| | ||||| | || | Sbjct 898 ATGAGGTTGCTGTCTGCAACCTTGCTTCTCTGGCCCTG----CCTTCGTTC---AT--CA 848 Query 94667 AC-ACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATG--G 94723 || ||| | ||||| | || | || || | || || | ||| || | Sbjct 847 ACTACG-ATGATGCTTGCTATGACTTCCAGAAGTTGCACGACGTCAC--ACAGGTTGTCG 791 Query 94724 TCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACT 94783 | |||||||||||| | |||||| |||| |||||| || |||| || ||| Sbjct 790 TTCGCAACCTGAACAGGATTATCGACGTGAACCACTACCCTGTTACGGAAGCTCGCAACA 731 Query 94784 CAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGA 94843 ||| || || || ||||| || | || ||||||||| | || || || | | Sbjct 730 GCAACATGCGACACCGACCCATTGGTGTTGGTGTCCAGGGTCTTGCTGATGCTTTCCTTG 671 Query 94844 TGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAA 94903 |||| |||| | ||| ||| ||| || | | || | | || ||||| | Sbjct 670 CTCTGCGCATGCCTTTCGAGTCTCCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGA 611 Query 94904 GCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCAC 94963 ||| || | | ||| | | || || || |||||| ||| | || || Sbjct 610 CCATCTACCATGCTGCCCTCACTGCTTCGGTGCAGCTGGCCA---AGGAGGAGGGTCCCT 554 Query 94964 ACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTG 95023 || | ||| || || ||| |||| ||| | ||||||||| | ||| || Sbjct 553 ACTCCACCTTCAAGGGCTCTCCCGCCTCTGAGGGTATTCTCCAGTTCGACATGTGGAATG 494 Query 95024 TGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTG 95083 ||||||| || | || | |||||||| || || | | || | | ||||| Sbjct 493 TGAAGCCTTCTGACCTCTGGGACTGGGAGAACCTCCGGGAGCAGGTCAAGGAGCACGGCA 434 Query 95084 TGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCA 95143 | ||| ||||| | ||||| ||||| || ||| || |||||||||| |||| Sbjct 433 TTCGCAACAGTCTGCTGCTTGCCCCTATGCCTACTGCCAGTACTTCGCAGATCCTGGGCA 374 Query 95144 ACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGG 95203 ||||||||| ||||| || | |||||||||| | ||| | | || || ||||| || | Sbjct 373 ACAACGAGTGCTTCGAGCCTTACACCTCCAACATCTACCAGCGCCGTGTCCTCGCTGGCG 314 Query 95204 AATTCCCCGTCATCAACAAGCACCTCCTACGGGACC-TGACGTCTCTGGG--TGT-GTGG 95259 | |||| ||| ||||| || || ||||| || | | |||| ||| || | Sbjct 313 AGTTCCAGGTCGTCAACCCCTGGCTGCTCAAGGACCTTGTTGAC-ATGGGCCTGTGGTCG 255 Query 95260 GGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAA 95319 | || || | || |||| | | | || ||||| ||| ||||||||||||| | Sbjct 254 GATGCCA---TGAAAAACCGAATCATTGCCGAGAACGGTTCCATCCAGAACATCCCCAAC 198 Query 95320 ATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373 || || | || ||||||| |||||||||||||| |||||||| |||||||| Sbjct 197 ATCCCCGCCGAGGTCAAGGCCCTCTACAAGACCGTCTGGGAGATTTCGCAGCGC 144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494389255655960