Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20tucumaniae_20[genbank_20GCA_5F001680725.1_202016-07-06] 54,001 sequences; 49,886,306 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq11483 241 2e-58 seq24306 95.1 2e-14 >seq11483 Length=1992 Score = 241 bits (266), Expect = 2e-58 Identities = 404/580 (70%), Gaps = 11/580 (2%) Strand=Plus/Plus Query 7408 CTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTC 7467 ||| || || ||||| ||||| | | ||||| || ||| | ||||| || || Sbjct 1411 CTTGTGCTTGCGTTTGAACTCATTAACAAAGTGGTTAACGAGACGGTTGTCGAAGTCCTC 1470 Query 7468 ACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTT 7527 |||||||| ||| || || || ||||| | ||||| || |||||||| | |||||| | Sbjct 1471 ACCACCCAGGTGAGTGTCACCGGCGGTAGACTTGACCTCGAAGATACCCTCCTCAATGGT 1530 Query 7528 TAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTC 7587 | | ||||||||| || ||||||||||| || || || ||||| ||||| ||| | Sbjct 1531 CAGGAGCGAAACATCGAAAGTACCACCACCAAGATCGAAGATGAGAACGTTGCGCTCGCC 1590 Query 7588 GTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACG 7647 || | ||||| ||||||||||| || || || || || || ||||| || || || || Sbjct 1591 CTCAATCTTCTTGTCGAGACCGTAGGCAATGGCGGCAGCGGTGGGTTCGTTGATGATTCG 1650 Query 7648 AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTT 7707 ||| ||| ||||||||||| | ||||| || || || || || || || ||||| Sbjct 1651 GAGAACGTTGAGGCCAGCAATGAGACCGGCATCCTTGGTGGCCTGGCGCTGGGAGTCGTT 1710 Query 7708 AAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGC 7767 |||||||| ||||| || ||||| |||| |||| ||| || || || || || || Sbjct 1711 GAAGTAGGCGGGGACAGTGACGACAGCGTTGTTGACGGTCTCGCCAAGGTAGGACTCGGC 1770 Query 7768 GATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGT 7827 | | ||| ||| ||||| || ||||| || || ||||| || | | || || | || Sbjct 1771 GGTCTCTCGCATCTTGGTGAGGACCATGGAGGAGATCTCCTCGGGGGTGAA-GGTCTTGT 1829 Query 7828 T-TCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACC---GGGGATAACCT 7883 | || || || || ||||| || || | ||| || || |||| | ||| | || Sbjct 1830 TCTCGCCCTTGAACTCAACCTCGATGACGGGCTT----GC--CACCCTTGTCGATGATCT 1883 Query 7884 TATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAA 7943 | | | | | ||||| ||| | || |||| |||| | ||||| | ||||| | Sbjct 1884 TGAAGGGGAAGTGCTTCATGTCGGCCTGAACCTCAGGGTCGGCGAACTTGCGACCGATCA 1943 Query 7944 GACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGC 7983 | ||||| || || || || ||||| | |||||||||||| Sbjct 1944 GGCGCTTGGCGTCGAAGACGGTGTTCTGGGGGTTCATGGC 1983 >seq24306 Length=703 Score = 95.1 bits (104), Expect = 2e-14 Identities = 134/188 (71%), Gaps = 3/188 (2%) Strand=Plus/Plus Query 7898 TTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCA 7957 ||||| ||| | || |||| |||| | ||||| | ||||| || ||||| || || Sbjct 2 TTCATGTCGGCCTGAACCTCAGGGTCGGCGAACTTGCGACCGATCAGGCGCTTGGCGTCG 61 Query 7958 AAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGT 8017 || || ||||| | |||||||||||| |||||||| || || || ||||| ||||| Sbjct 62 AAGACGGTGTTCTGGGGGTTCATGGCGACCTGGTTCTTGGCGGCATCACCGATCAGACGC 121 Query 8018 TCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCA 8077 || | || || || ||||| | || || || ||||| || || |||||||| || Sbjct 122 TC---GGTGTCGGTGAAACCGACGAAAGAGGGAGTGGTTCGGTTACCCTGGTCGTTGGCG 178 Query 8078 ATAATTTC 8085 || || || Sbjct 179 ATGATGTC 186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634704077420840