Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20tucumaniae_20[genbank_20GCA_5F001680725.1_202016-07-06] 54,001 sequences; 49,886,306 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq13449 248 1e-60 seq9934 132 6e-26 seq17274 84.2 3e-11 >seq13449 Length=2090 Score = 248 bits (274), Expect = 1e-60 Identities = 972/1509 (64%), Gaps = 51/1509 (3%) Strand=Plus/Minus Query 111546 TATTTTGGTCTCAAGACCCTCGAGAAAAGCTACCTCCA-AAGACTGGATGGTGTCTTGAT 111604 || ||||| ||||||| || ||| | |||||||| |||| || |||| | | Sbjct 1781 TACTTTGGCTTCAAGACTCTTGAGCGATCCTACCTCCTCAAGATTG-ATGGCAAGATTGT 1723 Query 111605 GGAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGA 111664 || || ||| ||||| ||||||| || | |||| ||| || || |||||||| Sbjct 1722 TGAGCGTCCCCAGCACATGATCATGCGTGTGTCTGTCGGCATCTGGGGTGACGATATTGA 1663 Query 111665 TTCTGTTTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAAC 111724 ||| ||||||| ||| || |||||| | | |||| ||| || | || || Sbjct 1662 GCGTGTCCTGGAGACCTACAACCTGATGTCGAGCAAATTCTTCACCCATGCCTCCCCCAC 1603 Query 111725 CCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAA 111784 ||||||||| |||||||| || || || ||||| || ||||| | | | || Sbjct 1602 CCTCTTCAATGCTGGTACTCCCCAGCCTCAGCTGTCCTCATGCTTCCTGGTCGACATGAA 1543 Query 111785 GGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTG 111844 ||||| || | || ||||| | ||||||| |||||| ||||| ||| Sbjct 1542 AGAGGACAGCATTGAGGGTATTTATGATACTCTCAAGACCTGTGCCATGATCTCCAAGAT 1483 Query 111845 GGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGG 111904 ||| ||||||||||| || || |||| || | |||| ||| || || Sbjct 1482 GGCGGGTGGTATCGGCCTGAACGTCCACCGAATCCGTGCCACTGGCTCTTACATCGCTGG 1423 Query 111905 TACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 111964 ||| || ||| || | ||| | | || |||||||| || || ||| ||| || || Sbjct 1422 TACCAACGGTACCTCCAACGGTGTCACCCCCATGCTTCGTGTCTTCAACAACACTGCCCG 1363 Query 111965 CTATGTAAACCAAGCTGGGCGTCGCAAGGGATCTA------TCGCAGTCTATCTTGAGCC 112018 || || |||| | ||| |||| || || | || |||| |||||||| Sbjct 1362 GTACGTCGACCAGGGTGGCAA---CAAGCGACCTGGTGCCTTTGCCATCTACCTTGAGCC 1306 Query 112019 ATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGC 112078 |||||||| ||| || | ||||||||||| |||| ||||| || | ||||||| Sbjct 1305 CTGGCACGCAGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGT 1246 Query 112079 GCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGA 112138 || |||||| || ||| |||||||||||||| ||||||||||||||| | || || Sbjct 1245 CCGCGCCCGCGACCTGTTCCTGGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGTCGA 1186 Query 112139 GGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGA-TGCCG 112197 | ||| || | ||| | ||| | ||||| || || |||||||| |||| ||| Sbjct 1185 GAAGAACGGTGACTGGACCCTCATGTGTCCCAACGAGTGCCCCGGTCTGGCCGACTGCTA 1126 Query 112198 TGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAG------AAAGTCGGGCGA 112251 | || |||||||| || || || ||| |||||| ||| | | | |||| || Sbjct 1125 T-GGCGAGGAGTTCGAGGCTCTTTACGAAAAGTATGAGAAGGCGGGCAAGGGTCGCAAGA 1067 Query 112252 CTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTG 112311 | || || |||| || | ||| | || || ||| || | || |||||||| | Sbjct 1066 CCATGAAGG-CCCAGAAGC-----TCTGGTATGCCATCCTCGAGGCGCAGACCGAGACCG 1013 Query 112312 GTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGG 112371 | | || | ||||| ||||| ||| ||| |||| ||||| || || ||||| ||| Sbjct 1012 GCAACCCCTTCATGCTCTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGG 953 Query 112372 GTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGA 112431 | ||| || ||||| ||||| || || || | || | | | |||||| Sbjct 952 GCACCATCCGTAGCTCCAATCTCTGCACCGAGATTATCGAGTACTGCGCCCCTGATGAGG 893 Query 112432 CGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGA 112491 ||||| || ||||| || || | || || || | || || || || | || Sbjct 892 TTGCTGTCTGCAACCTTGCTTCTCTGGCCCTGCC----TTCGTTCAT-CAACTACGATGA 838 Query 112492 CATTTGATTATG------AAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAA 112545 ||| |||| | || | ||||| || || | |||| ||||| | Sbjct 837 TGCTTG-CTATGACTTCCAGAAGTTGCACGACGTCACACAGGTTGTCGTTCGCAACCTGA 779 Query 112546 ACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGAC 112605 |||| |||| || || ||||| ||| | ||||| || || ||| ||| Sbjct 778 ACAGGATTATCGACGTGAACCACTACCCTGTTACGGAAGCTCGCAACAGCAACATGCGAC 719 Query 112606 ACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATT-CTTTGTCGCCAC 112664 |||| || |||||| | |||||||| ||||| || |||| ||| || || || || || Sbjct 718 ACCGACCCATTGGTGTTGGTGTCCAGGGTCTTGCTGATGCTTTCCTTGCTCTG-CG-CAT 661 Query 112665 GCATTT-GATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCA 112723 || ||| || || ||| || || |||| || || || ||||| || || || Sbjct 660 GCCTTTCGAGTCTCCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATCTACCA 601 Query 112724 CGCCGCTCTTGAGGCGAGTTCGG---AGTTGGCAGAGGTTGATGGTCCATATGAAACCTT 112780 || || || || ||||| || |||| ||| || ||||| || ||||| Sbjct 600 TGCTGCCCTCACTGC---TTCGGTGCAGCTGGCCAAGGAGGAGGGTCCCTACTCCACCTT 544 Query 112781 TGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAA 112840 |||| ||||| || || | || | || || || || |||| |||| |||| | | Sbjct 543 CAAGGGCTCTCCCGCCTCTGAGGGTATTCTCCAGTTCGACATGT-GGAATGTGA-AGCCT 486 Query 112841 GCT--TCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAAC 112898 || | || |||||||| ||| ||| | |||||||| | || |||| ||| Sbjct 485 TCTGACCTCTGGGACTGGGAGAACCTCCGGGAGCAGGTCAAGGAGCACGGCATTCGCAAC 426 Query 112899 AGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAA 112958 ||||| || | || || ||||| || ||| || | || ||| |||| || || || Sbjct 425 AGTCTGCTGCTTGCCCCTATGCCTACTGCCAGTACTTCGCAGATCCTGGGCAACAACGAG 366 Query 112959 TGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTG 113018 ||||| || || ||||| | |||||||| | | | | |||||| || ||||| | Sbjct 365 TGCTTCGAGCCTTACACCTCCAACATCTACCAGCGCCGTGTCCTCGCTGGCGAGTTCCAG 306 Query 113019 ATTGTCAAC 113027 | |||||| Sbjct 305 GTCGTCAAC 297 >seq9934 Length=2663 Score = 132 bits (146), Expect = 6e-26 Identities = 204/286 (71%), Gaps = 4/286 (1%) Strand=Plus/Minus Query 102048 CTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGC-AGCTCTTTGAAGCCATCCA 102106 ||||| |||| || || ||||| |||| | | ||| | | ||||| | ||||| | Sbjct 660 CTCATTGACACCTACATCAAGGAGCCTGCTCA-ACGAACCTACCTCTTCAACGCCATTGA 602 Query 102107 AACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGT 102165 || | || || || | ||||| || || ||||| || ||| | | |||| Sbjct 601 GACCATCCCCTGCATCCGCAAGAAGGCCGACTGGGCCATCCGATGGATCCAGGACAAGAA 542 Query 102166 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 102225 | ||| |||||||| |||| ||| |||| ||||| || ||||||||||||||| | Sbjct 541 CTCGT-CCTTTGCTCAGCGTCTCGTCGCTTTTGCTGCCGTCGAGGGTATCTTCTTCAGCG 483 Query 102226 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 102285 || |||| | | || | |||||||||||||| || |||||||| || || ||| | Sbjct 482 GTGCCTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTTT 423 Query 102286 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 |||||||||| ||||||||||||||||| || ||| || ||||| Sbjct 422 CCAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACCGACTTTGC 377 >seq17274 Length=1542 Score = 84.2 bits (92), Expect = 3e-11 Identities = 244/369 (66%), Gaps = 14/369 (4%) Strand=Plus/Plus Query 15975 AAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 16034 ||||| |||||||| |||| || |||||| | ||| ||||| || || || | Sbjct 17 AAACCGTCCATCTCGGTCAGAATCTGGTTCAGAGTCGCCTCCCGCTCGTCGTTGCCACCG 76 Query 16035 ATACCACCAGCACTGC---GTTGCTTTC---CCACGGCATCAATCTCATCAATGAAGACG 16088 | ||| | |||| || || || | | ||| || |||||||| || |||| | Sbjct 77 AAACCCCGGCCACTCTCCTGTCGCGCTCGACCAATGGCGTCGATCTCATCGATAAAGATG 136 Query 16089 ATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACA 16148 ||||| || || | || | | | || || || || ||||| | || ||| Sbjct 137 ATGCAAGGAGCGTTCTTACGGCCTTCGGCGAACAGGTCTCGCACACGGGAAGGACCAACA 196 Query 16149 CCAACAAACATCTCCACAAAGTTTGCGGCGGA-ACATTGGATGAAGGGGACATTAGATTC 16207 |||||||||||||| || || | | || ||| || | ||||||||| ||| || Sbjct 197 CCAACAAACATCTCGACGAATTCAGAACCGCTCACACTGAA-GAAGGGGACTCCAGACTC 255 Query 16208 ACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGC 16267 || || | || |||||| | |||||||||||||| || || || || | ||| Sbjct 256 GCCAGCTGTAGCCTTGGCGAGCAATGTCTTACCCGTACCAGGGGGGCCAGCCAGAATGGC 315 Query 16268 ACCTCGTGGAATCTTGGCGCC--ACTTC-CAAAGTATCTCTCAGGTTGCTTAAGAAAATC 16324 ||||| ||||||||||| || |||| |||| | |||| || ||||| || || Sbjct 316 TCCTCGGGGAATCTTGGCACCGAGCTTCTCAAACT---TCTCGGGCTGCTTCAGGAAGCT 372 Query 16325 CACAATCTC 16333 ||||| ||| Sbjct 373 CACAAACTC 381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620323391120720