Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20tucumaniae_20[genbank_20GCA_5F001680725.1_202016-07-06] 54,001 sequences; 49,886,306 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq13449 444 1e-119 seq9934 206 5e-48 >seq13449 Length=2090 Score = 444 bits (492), Expect = 1e-119 Identities = 1157/1737 (67%), Gaps = 69/1737 (4%) Strand=Plus/Plus Query 212696 GTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATC 212755 ||| |||||||| ||| || ||||| | | | ||| || ||||| | | || | Sbjct 84 GTTGAGGGACTGGGACTGATCAATGAAGGCACCTCGGTCGGCAGCCATCTGAACGACCTG 143 Query 212756 TCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGG 212815 | ||| || | |||||| ||||||||| ||| | |||| || | |||| | ||| Sbjct 144 GCGCTGCGAAATCTCCCAGACGGTCTTGTAGAGGGCCTTGACCTCGGCGGGGATGTTGGG 203 Query 212816 GATGTTCTGCACAGACCCCCTGTGTATGGTCA--GCTGCAGGCG--CATGTCCTCGTTCC 212871 ||||||||| | || || || | | | || | | | | |||| | || || Sbjct 204 GATGTTCTGGATGGAACC---GT-TCTCGGCAATGATTCGGTTTTTCATGGCATCCGACC 259 Query 212872 AGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACCTG 212931 | |||||| || | ||| ||||| ||| |||||||| | |||||| || || | Sbjct 260 ACAGGCCCATGTCAACAAGGTCCTTGAGCAGCCAGGGGTTGACGACCTGGAACTCGCCAG 319 Query 212932 AGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCA 212991 ||| || | | |||||| | ||| || ||||| ||||||| || ||||||||| |||| Sbjct 320 CGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTGCCCA 379 Query 212992 GAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGT 213051 | ||||| | ||| ||||| || ||||| || || | ||| |||||||| | | |||| Sbjct 380 GGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCAAGCAGCAGACTGTTGCGAATGCCGT 439 Query 213052 GCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCT 213111 |||| || | ||| || | |||||||||| | |||| ||| || Sbjct 440 GCTCCTTGACCTGCTCCCGGAGGTTCTCCCAGTCCCAGAGGTCAGA-AGG--------CT 490 Query 213112 TCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCA----CGGGGCTGCCCTGGTAA 213167 |||| ||||||||||| ||||| | || || |||| |||| ||||| | | Sbjct 491 TCACATTCCACATGTCGAACTGGAGAATACC----CTCAGAGGCGGGAGAGCCCTTGAAG 546 Query 213168 GAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCA-GGACGCCTGCAGGGCAGCGTAGTA 213226 | ||||||||| || | |||||||||||||| ||| || || |||||||| | ||| Sbjct 547 GTGGAGTAGGGACCCTCCTCCTTGGCCAGCT-GCACCGAAGCAGTGAGGGCAGCATGGTA 605 Query 213227 GATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCAT 213286 |||||| || || |||| | ||||||||| ||||| || ||| ||| ||||| Sbjct 606 GATGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGAGACTCGAAAGGCATGCG 665 Query 213287 CATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAG 213346 || |||| ||||||| || |||||||| || | || ||||||| ||||| || Sbjct 666 CAGAGCAAGGAAAGCATCAGCAAGACCCTGGACACCAACACCAATGGGTCGGTGTCGCAT 725 Query 213347 GTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGT 213405 ||| ||| |||| ||| | ||||| ||| |||||| ||| |||| |||| Sbjct 726 GTTGCTGTTGCGAGC-TTCCGTAACAGGGTAGTGGTTCACGTCGATAATCCTGTTCAGGT 784 Query 213406 TGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGC------ 213459 |||| | | || | ||||| | | || ||| || ||| | |||| Sbjct 785 TGCGAACGACAACCTGTGTGACGTCGTGCA---ACTTCTG---GAAGTCATAGCAAGCAT 838 Query 213460 CCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCT 213519 | ||| | | ||| ||||||||| | || |||||||| || || ||||| | Sbjct 839 CATCGTAGTTGATGAACGAAGGCAGGGCCAGAGAAGCAAGGTTGCAGACAGCAACCTCAT 898 Query 213520 GAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGT 213579 || | | |||||| || ||||||||||| || ||| || |||||||||||||||| Sbjct 899 CAGGGGCGCAGTACTCGATAATCTCGGTGCAGAGATTGGAGCTACGGATGGTGCCCAGGT 958 Query 213580 TCTGGTGGTTTGACTTTGCGTTGGCAG-AATCCTTGTAGAGCATGTAGGGGGACCCGGTC 213638 ||| ||| ||| ||||| | |||| ||||||||||||||| ||||| |||||| Sbjct 959 TCTTCTGG-TTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCGGTC 1017 Query 213639 TCTAGCTGGGACACCAGTATCTGGC--TCCAGAGGTACCTGGCCTTGACCACCCGCCTGA 213696 || ||| | | | || | |||| |||||| | | |||||| || | || Sbjct 1018 TCGGTCTGCGCCTCGAGGA--TGGCATACCAGAGCTTCTGGGCCTT---CATGGTCTTGC 1072 Query 213697 CAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCC 213756 | | | || ||| |||| |||||| || | | ||| || | ||| || Sbjct 1073 GACCCTTGCCCGCCTTCTCATACTTTTCGTAAAGAGCCTCGAACTCCTCGCCATAGCAGT 1132 Query 213757 TGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCG-TCATCTCTGACT 213815 | |||| || || || ||||||||||||| ||||||| ||| || |||| ||| Sbjct 1133 CGGCCAGACCGGGGCACTCGTTGGGACACATGAGGGTCCAGTCACCGTTCTTCTC-GACA 1191 Query 213816 CTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCG 213875 | || |||||| || || || | ||| || || ||||||||| | || | ||| Sbjct 1192 CGCTTCATGAAGAGATCGGGAATCCAGAGAGCCAGGAACAGGTCGCGGGCGCGGACCTCC 1251 Query 213876 TCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCC 213935 ||| || ||| |||||||| || || || ||||||| || |||||||| ||||| Sbjct 1252 TCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCA 1311 Query 213936 ATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCACCAGCCTGGCCACC 213992 | ||||||||||||||| || | || | ||||| |||||||| || || ||| Sbjct 1312 AGGTAGATGGCAAAGGCACCAGGTCGCTTGTTGCCACCCTGGTCGACGTACCGGGCAGTG 1371 Query 213993 ATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATA 214052 ||||||||| || || | ||| | |||||||| |||||||| || || || Sbjct 1372 TTGTTGAAGACACGAAGCATGGGGGTGACACCGTTGGAGGTACCGTTGGTACCAGCGATG 1431 Query 214053 TACGAGCCGGAGGCCC---TCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTG 214109 || ||||| | ||| | | ||| | | | || || || ||||| || |||| Sbjct 1432 TAAGAGCCAGTGGCACGGATTCGGTGG---ACGTTCAGGCCGATACCACCCGCCATCTTG 1488 Query 214110 GAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGG 214169 ||||||||||| ||| | | | ||| || || || | |||||||| ||| | | | Sbjct 1489 GAGATCATGGCACAGGTCTTGAGAGTATCATAAATACCCTCAATGCTGTCCTCTTTCATG 1548 Query 214170 TTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGGG 214229 | | || |||||| || ||||| ||| || | |||| ||||| || |||||| Sbjct 1549 TCGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGAGTACCAGCATTGAAGAGGGTGGGG 1608 Query 214230 CTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGGATG 214289 ||||||| | | || ||| | || | || |||||||||||||||| || Sbjct 1609 GAGGCATGGGTGAAGAATTTGCTCGACATCAGGTTGTAGGTCTCCAGGACACGCTCAATA 1668 Query 214290 TCGTGCTTGTGGATCTGTAGAG-CGCACCTCATCAGCATGTGCTGGGGCCTCTCTATGGG 214348 |||| ||| | || | || | ||| | |||||||||||| | ||| | Sbjct 1669 TCGTCACCCCAGATGCCGACAGACACA-CGCATGATCATGTGCTGGGGACGCTC-AACAA 1726 Query 214349 TCCTTTGGGGCC---CTTGAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAAAGTA 214402 || ||| | |||||| |||||||| ||||| ||||||||||| |||||||| Sbjct 1727 TC--TTGCCATCAATCTTGAGGAGGTAGGATCGCTCAAGAGTCTTGAAGCCAAAGTA 1781 >seq9934 Length=2663 Score = 206 bits (228), Expect = 5e-48 Identities = 487/729 (67%), Gaps = 11/729 (2%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | ||||| |||||||| ||||| || | | ||||||||||| Sbjct 85 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTC 144 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957 ||||||| ||||||||||| | || || ||| | || ||| | | || | Sbjct 145 CATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCT-TCTCGTTGCCGAGGGCGACGAGGA 203 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 || | || |||||| |||||||||| | ||||||| | ||||||||| | |||| Sbjct 204 GGCGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCGGCGTTCATGCCGAGCAGGG 263 Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077 ||| | |||| || || ||||||| ||| || ||||| || | || | Sbjct 264 CGCAGGGGAGGGCCTCGGTCAGGAACTCCTGCTCAATGGTGACGGCATCGGTGATGATGT 323 Query 48078 GCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAA 48137 || | | || || || | || | | | | || | ||| | ||| |||| Sbjct 324 CCTGGATGACCTGCT-TGCTGGCACG--GCCCTTGAGGTGGGAGTGGAGGAGGCATGCAA 380 Query 48138 AGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCA 48197 |||| |||| | || ||||| || ||||||| ||||||| ||| || ||||||| Sbjct 381 AGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCAGGCA 440 Query 48198 TGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCT 48257 ||| || | || ||||||||||| || | || || | || ||||||||| |||| Sbjct 441 TGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCT 500 Query 48258 CCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGG 48317 | || || || || ||| ||| | || | || || | ||||||||| |||||| Sbjct 501 CGACGGCAGCAAAAGCGACGAGACGCTGAGCAAAGGACGAGTTCTTGTCCTGGATCCATC 560 Query 48318 AAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCT 48377 | |||||||| |||||||| |||||| || || ||||| ||||| |||||| | Sbjct 561 GGATGGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTGAAGAGGT 620 Query 48378 TCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACATCTCAG 48434 | | | | | | ||| | ||||| | |||| ||| | ||| |||| | Sbjct 621 AGGTTCGTTGAGCAGGCTCCTTGATGTAGGTGTCAATGAGGAGC---GAGTAGGTCTCGG 677 Query 48435 AGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCA 48494 |||| | ||||| || ||||||||| ||||||||| | |||||| | ||| | Sbjct 678 AGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGGGCCTCGGGGATCTGGA 737 Query 48495 CTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGA 48554 | || | ||||| ||| | || ||||| ||||| || || || || ||||| |||| Sbjct 738 CCTCGCCGCTGAATCGCTCGACAAGGTTCTCGTTGACGATGCCGTCAGATGCAGCGAAGA 797 Query 48555 AGGCAAGGA 48563 |||| |||| Sbjct 798 AGGCGAGGA 806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 930904003715840