Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20tucumaniae_20[genbank_20GCA_5F001680725.1_202016-07-06] 54,001 sequences; 49,886,306 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq13449 192 7e-44 >seq13449 Length=2090 Score = 192 bits (212), Expect = 7e-44 Identities = 1042/1638 (64%), Gaps = 47/1638 (3%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| ||||| ||||||| || | |||||||| || || || ||||| |||| Sbjct 1715 CCCCAGCACATGATCATGCGTGTGTCTGTCGGCATCTGGGGTGACGATATTGAGCGTGTC 1656 Query 75272 TTGGAGACATACGACAAGATGTCCCAAGGTA--TGTTCATTCACGCAACACCAACCCTCT 75329 ||||||| ||| || |||||| || | | |||| || || | || ||||||| Sbjct 1655 CTGGAGACCTACAACCTGATGTCG--AGCAAATTCTTCACCCATGCCTCCCCCACCCTCT 1598 Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389 ||||||||||||| || || ||| ||||| |||||||| ||| || || |||| Sbjct 1597 TCAATGCTGGTACTCCCCAGCCTCAGCTGTCCTCATGCTTCCTGGTCGACATGAAAGAGG 1538 Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449 || || | ||||| |||| ||||| | | ||||| ||||| ||| ||| | Sbjct 1537 ACAGCATTGAGGGTATTTATGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCGG 1478 Query 75450 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 75509 | ||||| || || || |||| | | |||| | ||| || || || | Sbjct 1477 GTGGTATCGGCCTGAACGTCCACCGAATCCGTGCCACTGGCTCTTACATCGCTGGTACCA 1418 Query 75510 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 75569 | ||| || | ||| | | || |||||||| || || ||| ||| || || || | Sbjct 1417 ACGGTACCTCCAACGGTGTCACCCCCATGCTTCGTGTCTTCAACAACACTGCCCGGTACG 1358 Query 75570 TAAATCAAGCGGGGCGTC--GCAA--GGGGTCCATCGCGGTCTACTTGGAACCATGGCAT 75625 | | | || | ||| | || | || || | || ||||| | || || ||||| Sbjct 1357 TCGA-CCAGGGTGGCAACAAGCGACCTGGTGCCTTTGCCATCTACCTTGAGCCCTGGCAC 1299 Query 75626 GCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGT 75685 || ||| || | ||||||||||| | || ||||| || | || |||| || Sbjct 1298 GCAGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGTCCGCGCC 1239 Query 75686 AGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGT 75745 | || || || | || |||||||| || || ||||||||||| || ||| || Sbjct 1238 CGCGACCTGTTCCTGGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGTCGAGAAGAAC 1179 Query 75746 GGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGAC-GCGGTGGGTGA 75804 ||| | ||| | || | ||||| || || || ||||| ||||| || | || || Sbjct 1178 GGTGACTGGACCCTCATGTGTCCCAACGAGTGCCCCGGTCTGGCCGACTGCTAT-GGCGA 1120 Query 75805 GGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTA---GAGCCAATGCGACTGT 75861 |||||| || || || ||| ||||||||| ||| ||| | | ||| ||| | Sbjct 1119 GGAGTTCGAGGCTCTTTACGAAAAGTATGAGAAGGCGGGCAAGGGTCGCAA---GACCAT 1063 Query 75862 ACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCAT 75920 || | | || | | ||| | || || ||| | | ||||| ||||| || | || | Sbjct 1062 -GAAGGCCCAGAAGCTCTGGTATGCCATCCTCGAGGCGCAGACCGAGACCGGCAACCCCT 1004 Query 75921 ATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCA 75980 ||||| |||||||| || ||| ||||| ||||| ||||| |||| || ||| Sbjct 1003 TCATGCTCTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGCACCATCC 944 Query 75981 AGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTT 76040 ||||| ||||| ||||| || ||| | |||||| | |||||| ||||| | Sbjct 943 GTAGCTCCAATCTCTGCACCGAGATTATCGAGTACTGCGCCCCTGATGAGGTTGCTGTCT 884 Query 76041 GCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCA---ATGAAGAGACTCGCACTTTTG 76097 |||| | || || | ||||| || || ||| | || || || || | || Sbjct 883 GCAACCTTGCTTCTCTGGCCCTGCCTTCGTTCATCAACTACGATGATGCTTGC---TATG 827 Query 76098 ATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTG 76157 | | | || | || || ||||| || |||| || || ||| | | || | Sbjct 826 ACTTCCAGAAGTTGCACGACGTCACACAGGTTGTCGTTCGCAACCTGAACAGGATTATCG 767 Query 76158 ACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTG 76217 || || || || ||| | || || || || ||||||||| |||| |||| Sbjct 766 ACGTGAACCACTACCCTGTTACGGAAGCTCGCAACAGCAACATGCGACACCGACCCATTG 707 Query 76218 GTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATT-TTGTGCCGCTACGCATTT-GATTC 76275 || | ||||| || ||||| || |||| || || | || ||| | || ||| || || Sbjct 706 GTGTTGGTGTCCAGGGTCTTGCTGATGCTTTCCTTGCTCTG-CGC-ATGCCTTTCGAGTC 649 Query 76276 AGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGA 76335 || || ||| | || | ||||| || ||||| || || || |||| Sbjct 648 TCCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATCTACCATGCTGCCCTCAC 589 Query 76336 GGCGAGTT--GTG-AATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCC 76392 || || ||| | |||| | | | ||| |||| || || |||| ||||| Sbjct 588 TGC---TTCGGTGCAGCTGGCCAAGGAGGAGGGTCCCTACTCCACCTTCAAGGGCTCTCC 532 Query 76393 CGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCT--CAACTAC 76450 ||| || | || | || ||||| || |||| |||| ||||| || || | || Sbjct 531 CGCCTCTGAGGGTATTCTCCAGTTCGACATGT-GGAATGTGAAGCC-TTCTGACCTCTGG 474 Query 76451 GACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATG 76510 |||||||| ||| ||| | |||||||| | || |||| |||||||| || | Sbjct 473 GACTGGGAGAACCTCCGGGAGCAGGTCAAGGAGCACGGCATTCGCAACAGTCTGCTGCTT 414 Query 76511 GCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCA 76570 || || ||||| || ||| || | || ||| |||| || || || ||||| || || Sbjct 413 GCCCCTATGCCTACTGCCAGTACTTCGCAGATCCTGGGCAACAACGAGTGCTTCGAGCCT 354 Query 76571 TACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAG 76630 ||||| | |||||||||| | | | |||||| || ||||| | |||||| Sbjct 353 TACACCTCCAACATCTACCAGCGCCGTGTCCTCGCTGGCGAGTTCCAGGTCGTCAACCCC 294 Query 76631 CACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATC---TC 76687 || |||| ||||| | || || || ||||| | | ||||| | | || Sbjct 293 TGGCTGCTCAAGGACCTTGTTGACATGGGCCTGTGGTCGGATGCCATGAAAAACCGAATC 234 Query 76688 A-TGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAA 76746 | || || | | |||||||| || || ||| | | ||||| | || ||||| Sbjct 233 ATTGCCGAGAAC----GGTTCCATCCAGAACATCCCCAACATCCCCGCCGAGGTCAAGGC 178 Query 76747 TCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGATCG 76806 |||||| || || ||||| || | | | ||| || | ||||| || || || Sbjct 177 CCTCTACAAGACCGTCTGGGAGATTTCGCAGCGCCAGGTCGTTCAGATGGCTGCCGACCG 118 Query 76807 TGGTCGCTTCATTGATCA 76824 ||| |||||||||||| Sbjct 117 AGGTGCCTTCATTGATCA 100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596166908062880