Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20tucumaniae_20[genbank_20GCA_5F001680725.1_202016-07-06] 54,001 sequences; 49,886,306 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq13449 214 2e-50 >seq13449 Length=2090 Score = 214 bits (236), Expect = 2e-50 Identities = 916/1424 (64%), Gaps = 39/1424 (3%) Strand=Plus/Plus Query 110681 AACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCA 110740 ||||| || |||||| | | | |||||||||| | ||||| || || ||||| || Sbjct 310 AACTCGCCAGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCG 369 Query 110741 TTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTA 110800 || || |||| ||| || | || ||| || ||||| || || | || |||||||| Sbjct 370 TTGTTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCAAGCAGCAGACTGTTG 429 Query 110801 CGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTG--AGCTTGG 110858 |||| || | |||||||| | ||| ||| |||||||| || | || || Sbjct 430 CGAATGCCGTGCTCCTTGACCTGCTCCCGGAGGTTCTCCCAGTCCCAGAGGTCAGAA-GG 488 Query 110859 TTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGG 110918 ||||| |||| ||||||| ||||| || | || | || |||||||| |||| |||| Sbjct 489 CTTCACATTCC-ACATGTCGAACTGGAGAATACCCTCAGAGGCGGGAGAGCCCTTGAAGG 547 Query 110919 TTTCATAGGAACCTTGGGCTTCAGCCAATT-CACAGCTCGCCTCCAGGGATGCGTGATAC 110977 | |||| ||| | | | |||| | ||| | || |||| || || || Sbjct 548 TGGAGTAGGGACCCTCCTCCTTGGCCAGCTGCACCGAA-GCAGTGAGGGCAGCATGGTAG 606 Query 110978 ATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATC-AAATGCGTAGCG 111036 ||||| || ||||| | || | ||| || || || || ||| || | ||| Sbjct 607 ATGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGAGACTCGAAAGGCAT-GCG 665 Query 111037 GCACAA-AATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCA 111095 || | || || |||| || ||||| || ||||| | |||||| |||| |||||||| Sbjct 666 -CAGAGCAAGGAAAGCATCAGCAAGACCCTGGACACCAACACCAATGGGTCGGTGTCGCA 724 Query 111096 TATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGAT 111155 | || || || || | ||| || || || ||| || | | ||| || | Sbjct 725 TGTTGCTGTTGCGAGCTTCCGTAACAGGGTAGTGGTTCACGTCGATAATCCTGTTCAGGT 784 Query 111156 TTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTT 111215 | |||| || ||||| || || | || | | ||| | || || || | Sbjct 785 TGCGAACGACAACCTGTGTGACGTCGTGCAACTTCTGGAAGTCATA---GCAAGCATCAT 841 Query 111216 CAT---TGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCT 111272 | | ||| || || ||||| | || || | ||||| ||||| |||||| Sbjct 842 CGTAGTTGATGAACGAAGGCAGGGCCAGAGAAGCAAGGTTGCAGACAGCAACCTCATCAG 901 Query 111273 TATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCT 111332 | |||||| | ||| || || || | ||||| || || || |||| |||| Sbjct 902 GGGCGCAGTACTCGATAATCTCGGTGCAGAGATTGGAGCTACGGATGGTGCCCAGGTTCT 961 Query 111333 TTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCG 111392 | ||||| ||||| |||||| ||||||||||||||| |||| | || ||||| | Sbjct 962 TCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGG 1021 Query 111393 TCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTG-GCCCG 111450 |||| | | ||| || || | ||| | | || | | || |||| ||| | || Sbjct 1022 TCTGCGCCTCGAGGATGGCATACCAGAGCTTCTGGGCCT----TCATGGTCTTGCGACCC 1077 Query 111451 T--CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGC-GTCGGA 111507 | ||| || ||| |||||| ||| || || || |||||||| ||| || ||||| Sbjct 1078 TTGCCCGCCTTCTCATACTTTTCGTAAAGAGCCTCGAACTCCTC-GCCATAGCAGTCGGC 1136 Query 111508 GAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTT 111567 ||||| || || || ||||| | || | ||| | ||| | ||| || ||||| Sbjct 1137 CAGACCGGGGCACTCGTTGGGACACATGAGGGTCCAGTCACCGTTCTTCTCGACACGCTT 1196 Query 111568 CATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTC 111627 |||||| || || |||||||| || | || || || | || |||| || | Sbjct 1197 CATGAAGAGATCGGGAATCCAGAGAGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTT 1256 Query 111628 ACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATA 111687 || ||||| || | ||||||||||| | || ||| |||||||| |||||||| || Sbjct 1257 GCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTA 1316 Query 111688 GACTGCGA------TAGATCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGC 111741 || || | || || ||| | | ||| | || | || || || || ||| Sbjct 1317 GATGGCAAAGGCACCAGGTCGCTT--GTTG-CCACCCTGGTCGACGTACCGGGCAGTGTT 1373 Query 111742 GTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACG 111801 ||| || || |||||||| || | | ||| | || ||| || || || || Sbjct 1374 GTTGAAGACACGAAGCATGGGGGTGACACCGTTGGAGGTACCGTTGGTACCAGCGATGTA 1433 Query 111802 AGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGAT 111861 ||| | |||| | | |||| || || || ||||| || ||| ||| ||||| Sbjct 1434 AGAGCCAGTGGCACGGATTCGGTGGACGTTCAGGCCGATACCACCCGCCATCTTGGAGAT 1493 Query 111862 TTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGAT 111921 ||||| | | ||||| |||| ||||| | || |||||| || || ||| Sbjct 1494 CATGGCACAGGTCTTGAGAGTATCATAAATACCCTCAATGCTGTCCTCTTTCATGTCGAC 1553 Query 111922 AAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGC 111981 |||||||| ||||| ||| || || |||||||||||||||||||| || | || Sbjct 1554 CAGGAAGCATGAGGACAGCTGAGGCTGGGGAGTACCAGCATTGAAGAGGGTGGGGGAGGC 1613 Query 111982 GTGAATGAACA--TACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCT 112039 || |||| | | || |||||| || ||| ||||||| |||| ||||| || Sbjct 1614 ATGGGTGAAGAATTTGCT--CGACATCAGGTTGTAGGTCTCCAGGACACGCTCAATATCG 1671 Query 112040 TCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083 || || |||||||| | || ||||||| ||||| ||| || Sbjct 1672 TCACCCCAGATGCCGACAGACACACGCATGATCATGTGCTGGGG 1715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627608070549600