Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20tucumaniae_20[genbank_20GCA_5F001680725.1_202016-07-06] 54,001 sequences; 49,886,306 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq13449 174 2e-38 seq9934 132 6e-26 >seq13449 Length=2090 Score = 174 bits (192), Expect = 2e-38 Identities = 903/1423 (63%), Gaps = 37/1423 (3%) Strand=Plus/Plus Query 118155 AACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCA 118214 ||||| || |||||| || | | | ||||| |||| ||||| ||||| |||||||| Sbjct 310 AACTCGCCAGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCG 369 Query 118215 TTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTA 118274 ||||| |||| ||| || | || ||| || ||||| || || | || || ||||| Sbjct 370 TTGTTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCAAGCAGCAGACTGTTG 429 Query 118275 CGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTC 118334 || | || | ||| | | | ||| ||| |||||||| || | | | Sbjct 430 CGAATGCCGTGCTCCTTGACCTGCTCCCGGAGGTTCTCCCAGTCCCAGAGGTCAGAAGGC 489 Query 118335 TCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTC 118394 | | | | |||||| || |||||||| ||||| | || || || || |||| || || Sbjct 490 TTCACATTCCACATGTCGAACTGGAGAATACCCTCAGAGGCGGGAGAGCCCTTGAAGGTG 549 Query 118395 TCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTC-GCCTCGAGGGCTGCGTGATACAT 118453 || || ||||| ||| |||| | | | | || |||||| || || || || Sbjct 550 GAGTAGGGACCCTCCTCCTTGGCCAGCT-GCACCGAAGCAGTGAGGGCAGCATGGTAGAT 608 Query 118454 TGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCA 118513 || || || || | || | | |||||| || || || | | || || Sbjct 609 GGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGAGACTCGAAAGGCATGCG-CA 667 Query 118514 CAA-AATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATAT 118572 | || || |||| || ||||| |||||||| | ||||| || || |||| ||| | Sbjct 668 GAGCAAGGAAAGCATCAGCAAGACCCTGGACACCAACACCAATGGGTCGGTGTCGCATGT 727 Query 118573 TAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTT 118632 | || ||||| | || || || ||| ||||||| ||| || || || Sbjct 728 TGCTGTTGCGAGCTTCCGTAACAGGGTAGTGGTTCACGTCGATAATCCTGTTCAGGTTGC 787 Query 118633 TGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCAT 118692 |||||||| ||||| || || | ||| | | | ||| | || || || || | Sbjct 788 GAACGACAACCTGTGTGACGTCGTGCAACTTCTGGAAGTCATA---GCAAGCATCATCGT 844 Query 118693 ---TGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTAT 118749 ||| || ||| ||||| | || || || || || |||| |||||| Sbjct 845 AGTTGATGAACGAAGGCAGGGCCAGAGAAGCAAGGTTGCAGACAGCAACCTCATCAGGGG 904 Query 118750 CAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTT 118809 | |||||| ||||| || ||||| | || || || |||||||||| |||||| | Sbjct 905 CGCAGTACTCGATAATCTCGGTGCAGAGATTGGAGCTACGGATGGTGCCCAGGTTCTTCT 964 Query 118810 GATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTT 118869 | || ||| ||| || |||||||| |||||| | || | || ||||| || | Sbjct 965 GGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCT 1024 Query 118870 GGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGG----CTCG 118924 | | || ||| || || | ||||| | || | || || ||| ||| || | Sbjct 1025 GCGCCTCGAGGATGGCATACCAGAGCTTCTGGGCCTT---CA-TGGTCTTGCGACCCTTG 1080 Query 118925 CCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAG 118984 ||| |||| || |||||| ||| || || || ||||| || || | || | || Sbjct 1081 CCCGCCTTC-TCATACTTTTCGTAAAGAGCCTCGAACTCCTCGCCATAGCAGTCGGCCAG 1139 Query 118985 CCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCAT 119044 || || || | || || | ||| | ||| | ||| || ||| || |||||||| Sbjct 1140 ACCGGGGCACTCGTTGGGACACATGAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCAT 1199 Query 119045 GAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCC 119104 |||||| || || |||||||| ||| ||| || || || ||| | || || | || Sbjct 1200 GAAGAGATCGGGAATCCAGAGAGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTGCC 1259 Query 119105 CTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACAC 119164 || || |||| || | || || | || ||| |||||||| || || ||||| | Sbjct 1260 GTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGAT 1319 Query 119165 CGCGATTGACCCCTTACGACGA------CCAGCCTGGTTTACATACCTCGCAGTGGCGTT 119218 || | | || | | || ||| |||||| || |||| |||||| ||| Sbjct 1320 GGCAAAGGCACC---AGGTCGCTTGTTGCCACCCTGGTCGACGTACCGGGCAGTGTTGTT 1376 Query 119219 AAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGT-CCCCCGA-ATACGA 119276 || ||||||||||| || ||| ||| | ||| || || || || ||| || || Sbjct 1377 GAAGACACGAAGCATGGGGGTGACACCGTTGGAGGTACCGTTGGTACCAGCGATGTAAGA 1436 Query 119277 GACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATT 119336 | | | |||| | || ||||| || || || ||||| || ||| ||| ||||| Sbjct 1437 GCC--AGTGGCACGGATTCGGTGGACGTTCAGGCCGATACCACCCGCCATCTTGGAGATC 1494 Query 119337 TGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATG 119396 || || | ||||| | | || || || || || ||| | || | ||| Sbjct 1495 ATGGCACAGGTCTTGAGAGTATCATAAATACCCTCAATGCTGTCCTCTTTCATGTCGACC 1554 Query 119397 AGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCG 119456 |||||||| |||| |||||| ||| |||||||| |||||||| || || | || Sbjct 1555 AGGAAGCATGAGGACAGCTGAGGCTGGGGAGTACCAGCATTGAAGAGGGTGGGGGAGGCA 1614 Query 119457 TGGATGAACA--TACCTTGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTT 119514 ||| |||| | | || |||||| || ||||||||||| ||| ||| || | Sbjct 1615 TGGGTGAAGAATTTGCT--CGACATCAGGTTGTAGGTCTCCAGGACACGCTCAATATCGT 1672 Query 119515 CCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGG 119557 | || || |||| || || ||||| | ||||| ||||| Sbjct 1673 CACCCCAGATGCCGACAGACACACGCATGATCATGTGCTGGGG 1715 >seq9934 Length=2663 Score = 132 bits (146), Expect = 6e-26 Identities = 527/815 (65%), Gaps = 21/815 (3%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| || || ||||||||||||||||| ||||| || | | | ||| |||||||| Sbjct 89 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTCCATG 148 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGACG 129846 || || || ||||| | | || | | | || | | | | |||||| || Sbjct 149 AAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTGCCGAGGGCGAC-GAGGAGGCG 207 Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906 || | |||| |||| ||||||| ||| |||| |||||| |||| ||| || Sbjct 208 GTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCGGCGTTCATGCCGAGCAGGGCGCA 267 Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966 ||||| || || | |||| ||| ||||||| || || || | |||| | || Sbjct 268 GGGGAGGGCCTCGGTCAGGAACTCCTGCTCAATGGTGACGGCATCGGTGATGATGTCCTG 327 Query 129967 AATGGTCTCCGTGC---CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTC 130023 ||| || | ||| || | | ||| | | | || ||| || | |||| || Sbjct 328 GATGACCTGCTTGCTGGCACGGCCCTTGAGGTGGGAGTGGAGGAGG--CATG-CAAAGTC 384 Query 130024 CTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAG 130083 ||| |||||||||||||| |||||||| || || || ||| ||| || |||||||| Sbjct 385 GGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCAGGCATGAG 444 Query 130084 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 130143 || |||||||| | |||||| || | ||| | || ||||||||| ||||| || Sbjct 445 GCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTCGAC 504 Query 130144 ACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAAACCACTTCA 130202 || || || | |||||||| ||||||||| || | |||| | | ||| | Sbjct 505 GGCAGCAAAAGCGACGAGACGCTGAGCAAAGGA-CGAGTTCTTGTCCTGGATCCATCGGA 563 Query 130203 TCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCT 130262 | ||||| | ||||| || ||| || |||| ||||| || || | ||||| | Sbjct 564 TGGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTGAAGAGGTAGG 623 Query 130263 TCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGA 130322 | || | || || |||||||| | || ||||| || || || ||| |||| Sbjct 624 TTCGTTGAGCAGGCTCCTTGATGTAGGTGTCAATGAGGAGCGAGTAGGTCTCGGAGTGGA 683 Query 130323 CCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCA 130381 | | ||| || | ||| | ||||||| | || || ||| ||||| ||||| Sbjct 684 TGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGGGCCTCGGGGATCTGGACCTC- 741 Query 130382 TCTGCAAAATTGTTATTGATA---TTCTCAAAAACAATTCCATCGGACCCAGCAAAAAAC 130438 | || ||| | | || | ||||| || || || || || |||| || || Sbjct 742 GCCGCTGAATCG--CTCGACAAGGTTCTCGTTGACGATGCCGTCAGATGCAGCGAAGAAG 799 Query 130439 GCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCA 130495 || ||||| | | ||| ||| || | | ||| || | |||||||||| Sbjct 800 GCGAGGATGTGGGAGACGAAGAACTGCTCGTCGGCAGTCAGGCGGTTGTTCCAGTCGTGG 859 Query 130496 AGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 |||||||| || | ||| | |||||| |||||||| Sbjct 860 AGATCCTTGGATAAATCAATCTCCTCGGCAGTCCA 894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618017748509560