Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20udum_20[genbank_20GCA_5F002194535.1_202017-06-15] 712 sequences; 56,380,608 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq667 125 2e-23 >seq667 Length=3682606 Score = 125 bits (138), Expect = 2e-23 Identities = 313/468 (67%), Gaps = 8/468 (2%) Strand=Plus/Minus Query 230170 TCGTTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGT 230229 || |||||| | |||||||| |||| | |||||||||||| || | ||| | | || Sbjct 2045454 TCCTTTGCCCAACGTCTCGTTGCCTTCGCTGCTGTTGAAGGTAT-CT-TCTTCAGCG-GT 2045398 Query 230230 TTCTGCGCC---ATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCT 230286 || |||| ||||| ||||| ||| ||| | ||||| || || | || Sbjct 2045397 GCCTTCGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCC 2045338 Query 230287 AACGAGTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCA 230346 |||||| ||||| ||| ||||||||||| || | || | | || | | || Sbjct 2045337 AACGAGCTCATCTCTCGTGACGAGGGTCTTCACACTGACTTTGCCTGCCTCCTCCACTCT 2045278 Query 230347 AAGCTCCAGAA-CAAGCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGA 230405 | ||| || | || | || | ||| | || | | ||||| || || || || Sbjct 2045277 CACCTCAAGGGTCGTGCCAGCAAGC-AGATGATCCAGGATATCATCACTGACGCCGTCAC 2045219 Query 230406 AAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGA 230465 | || |||||||| | ||| ||| |||| ||| ||| | ||||||||| |||| Sbjct 2045218 CATTGAGCAGGAGTTCCTCACTGAGGCTCTTCCCTGTGCCCTCCTCGGCATGAACTCTGA 2045159 Query 230466 ACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGA 230525 || ||| |||||||| || ||||| || || || | |||| || ||||| |||| Sbjct 2045158 CCTCATGAAGCAGTACATTGAGTTCGTCGCTGATCGTCTCCTTGTCGCTCTTGGCAACGA 2045099 Query 230526 GAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAA 230585 ||| || ||||| | | |||||||| | || |||||| ||| || || || || Sbjct 2045098 GAAGGTCTACAAGGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGGCGGCAA 2045039 Query 230586 GACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGT 230633 ||||||||||||||| ||||| || ||||| |||| | | ||||| Sbjct 2045038 GACCAACTTCTTCGAGAAGCGCGTTGCCGACTACCAGAAGGCCGGTGT 2044991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057814350000560