Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20udum_20[genbank_20GCA_5F002194535.1_202017-06-15] 712 sequences; 56,380,608 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq556 100 2e-16 >seq556 Length=5145791 Score = 100 bits (110), Expect = 2e-16 Identities = 149/207 (72%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCT 48581 ||| || ||| |||||| |||||||||||||||| | | || || ||||||| |||| Sbjct 1548853 ATGCAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTG-CGGCCGTCCTCAAGCT 1548911 Query 48582 GCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTT 48641 |||| ||| || | || || || ||||| || || | || ||||| ||| ||| | Sbjct 1548912 GCTTGCCGGCGAAGATCAAGCGTTGCTGGTCAGGAGGGATACCCTCCTTATCCTGAATCT 1548971 Query 48642 TCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACC 48699 | ||||| | | || || || |||| |||||| ||||| || ||||| || || Sbjct 1548972 TGGACTTGACGTTGTCG--ATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCC 1549029 Query 48700 GGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||| || || || ||||| |||||||| Sbjct 1549030 GGTCAGGGTCTTGACAAAGATCTGCAT 1549056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421247544592712