Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20udum_20[genbank_20GCA_5F002194535.1_202017-06-15] 712 sequences; 56,380,608 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq556 116 3e-21 >seq556 Length=5145791 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 || || ||||| || | ||| || ||||||| ||| ||| || | ||| || || Sbjct 1548122 GTTGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCATCTTCTAACTGCTTACCA 1548181 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 | ||||| | | |||||||| || |||||||| || ||||| | ||| || ||| Sbjct 1548182 GCGAAGATAAGACGCTGCTGATCAGGGGGAATACCCTCCTTGTCCTGAATCTTGCTCTTC 1548241 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 ||| | ||| ||||||| | ||||| |||| |||||||| |||||||||||||| Sbjct 1548242 ACGTTGTCGATAGTGTCACTGGACTCGACCTCAAGGGTGATGGTCTTTCCAGTAAGAGTC 1548301 Query 94991 TTCACAAAGATCTGCAT 95007 |||||||| |||||||| Sbjct 1548302 TTCACAAAAATCTGCAT 1548318 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 94805 TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGT 94864 |||| ||| || ||||| || | ||| ||||| | |||| | ||||| ||||| Sbjct 1548854 TGCAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTGC 1548913 Query 94865 TTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTT 94924 || ||| | ||||| || | |||||| || ||||| ||||| || || || | ||| || Sbjct 1548914 TTGCCGGCGAAGATCAAGCGTTGCTGGTCAGGAGGGATACCCTCCTTATCCTGAATCTTG 1548973 Query 94925 GCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTA 94984 | ||||||| | ||| |||||| | || || || | |||||||| || || || Sbjct 1548974 GACTTGACGTTGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGTC 1549033 Query 94985 AGAGTTTTCACAAAGATCTGCATG 95008 || || || ||||||||||||||| Sbjct 1549034 AGGGTCTTGACAAAGATCTGCATG 1549057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448287210208320