Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20udum_20[genbank_20GCA_5F002194535.1_202017-06-15] 712 sequences; 56,380,608 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq691 98.7 2e-16 seq667 95.1 2e-15 >seq691 Length=3034478 Score = 98.7 bits (108), Expect = 2e-16 Identities = 84/101 (83%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| || | ||||| | ||||| |||||||| || ||||||||||| ||||| Sbjct 1229366 GCCAAGCGTCACCGAAAGATCT-TGCGAGACAACATCCAGGGTATCACCAAGCCCGCTAT 1229424 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| ||||| || ||||| ||||||||| | |||| Sbjct 1229425 CCGACGTCTCGCTCGCCGAGGTGGTGTCAAGCGTATTTCTG 1229465 >seq667 Length=3682606 Score = 95.1 bits (104), Expect = 2e-15 Identities = 83/101 (82%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| || | ||| | | ||||| ||||| || |||||||| ||||| ||||| Sbjct 1702045 GCCAAGCGTCACCGAAAGATTT-TGCGAGACAACATTCAGGGAATCACGAAGCCCGCTAT 1702103 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| ||||||||||| || ||||||||| | |||| Sbjct 1702104 CCGACGTCTTGCTCGTCGTGGCGGTGTCAAGCGTATTTCTG 1702144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074549013416