Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20udum_20[genbank_20GCA_5F002194535.1_202017-06-15] 712 sequences; 56,380,608 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq556 86.0 5e-12 >seq556 Length=5145791 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || | |||||||| | || || | ||||||||| | | Sbjct 1548546 ATGCAAATCTTCGTCAAGACCCTTACTGGAAAGACTATCACTTTGGAAGTCGAGTCATCC 1548487 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || ||||| || | || || ||||| ||||| || || || |||||||||||| Sbjct 1548486 GATACCATTGATAATGTGAAGAGCAAGATCCAAGACAAGGAGGGTATTCCTCCCGATCAA 1548427 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| |||| || | || ||||||||||| || |||| ||| | || || ||| Sbjct 1548426 CAGCGACTCATCTTCGCTGGCAAGCAACTAGAGGATGGTCGAACTCTTTCAGACTACAAC 1548367 Query 24171 ATTCAAAAAGAATCTAC 24187 || || || |||||||| Sbjct 1548366 ATCCAGAAGGAATCTAC 1548350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429932269230360