Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20udum_20[genbank_20GCA_5F002194535.1_202017-06-15] 712 sequences; 56,380,608 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq556 95.1 1e-14 >seq556 Length=5145791 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || || || || |||||||||||||| | || ||||| |||| Sbjct 1548845 AGAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCC 1548904 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 ||||||||||||||||| | || | || |||||||| ||||| || || || || || Sbjct 1548905 TCAAGCTGCTTGCCGGCGAAGATCAAGCGTTGCTGGTCAGGAGGGATACCCTCCTTATCC 1548964 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || || | || || | || || || | || | |||| Sbjct 1548965 TGAATCTTGGACTTGACGTTGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTC 1549024 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||||| || || || || || ||||| Sbjct 1549025 TTGCCGGTCAGGGTCTTGACAAAGATCTGCAT 1549056 Score = 91.5 bits (100), Expect = 1e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||||| || ||||| || ||||||||||| || || | ||| || ||||| Sbjct 1548563 AGGACGAGATGAAGGGTGGATTCCTTCTGAATGTTGTAGTCGGCAAGGGTTCGGCCGTCT 1548622 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || || ||||| || ||| | || || ||||||||||| ||||| || || || || || Sbjct 1548623 TCGAGTTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGGATACCCTCCTTGTCC 1548682 Query 64352 TGTATTTT 64359 || || || Sbjct 1548683 TGGATCTT 1548690 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||| || || |||||||| |||| | || || | || || || |||||||| Sbjct 1548350 GTAGATTCCTTCTGGATGTTGTAGTCTGAAAGAGTTCGACCATCCTCTAGTTGCTTGCCA 1548409 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | ||||| ||||| || ||||||||||| || || || ||||| || || ||| Sbjct 1548410 GCGAAGATGAGTCGCTGTTGATCGGGAGGAATACCCTCCTTGTCTTGGATCTTGCTCTTC 1548469 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | ||||| | || ||||| | ||| | ||||| || || | || Sbjct 1548470 ACATTATCAATGGTATCGGATGACTCGACTTCCAAAGTGATAGTCTTTCCAGTAAGGGTC 1548529 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| |||||||| Sbjct 1548530 TTGACGAAGATTTGCAT 1548546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499640353161280