Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20udum_20[genbank_20GCA_5F002194535.1_202017-06-15] 712 sequences; 56,380,608 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq667 161 2e-34 >seq667 Length=3682606 Score = 161 bits (178), Expect = 2e-34 Identities = 350/518 (68%), Gaps = 7/518 (1%) Strand=Plus/Plus Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708 ||||||||| |||||||||||||| ||| ||| || |||||||| |||| ||||| Sbjct 2045020 CTTCTCGAAGAAGTTGGTCTTGCCGCCCAGGGAGATGTTCTCCATGAAGTCGAAGGGGTT 2045079 Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768 | | | ||| |||| || ||||| | || | | || || || || || Sbjct 2045080 GGTGGCCTTGTAGACCTTCTCGTTGCCAAGAGCGACAAGGAGACGATCAGCGACGAACTC 2045139 Query 159769 GATGTAGCTACA-CATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCG 159827 ||||| || | ||| | ||| |||| || || || || | ||| || || || | Sbjct 2045140 AATGTA-CTGCTTCATGAGGTCAGAGTTCATGCCGAGGAGGGCACAGGGAAGAGCCTCAG 2045198 Query 159828 ACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGA-CACGTTCGTAC 159886 || ||||||| |||||| ||| || || || | || | | || || | | | | Sbjct 2045199 TGAGGAACTCCTGCTCAATGGTGACGGCGTCAGTGATGATATCCTGGATCATCTGCTTGC 2045258 Query 159887 CCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCC 159946 ||| | || || ||| |||||||| |||||||| ||| || ||| Sbjct 2045259 T--GGCACGACCCT--TGAGGTGAGAGTGGAGGAGGCAGGCAAAGTCAGTGTGAAGACCC 2045314 Query 159947 TCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTTG 160006 ||||| |||||||||| ||||||||| | | | || || ||||||| |||||| ||| Sbjct 2045315 TCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGCATGAGACCACGCTTCTTG 2045374 Query 160007 AGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGCC 160066 ||||| || || | || || |||||||| || ||||| || || || || || || || Sbjct 2045375 AGCCAGAAGATAGAGGCGAAGGCACCGCTGAAGAAGATACCTTCAACAGCAGCGAAGGCA 2045434 Query 160067 ACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGCC 160126 ||||| | | |||| |||| || | || ||| |||| | ||||||| |||||| Sbjct 2045435 ACGAGACGTTGGGCAAAGGAGGAGTCCTTATCTTGGATCCATCGGATGGCCCAGTCAGCC 2045494 Query 160127 TTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAA 160164 |||||| |||||| || ||| ||| | |||||| || Sbjct 2045495 TTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTTGAA 2045532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795148123118720