Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20udum_20[genbank_20GCA_5F002194535.1_202017-06-15] 712 sequences; 56,380,608 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq556 93.3 3e-14 >seq556 Length=5145791 Score = 93.3 bits (102), Expect = 3e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTC-CGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 || ||||| ||||| ||||| | |||| | || |||| || | ||| || || || || Sbjct 1548128 TCCTTCTGGATGTTGTAGTCGCTCAAGG-TGCGACCATCTTCTAACTGCTTACCAGCGAA 1548186 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || || ||||| || | || | ||||||||||| |||||| || ||| Sbjct 1548187 GATAAGACGCTGCTGATCAGGGGGAATACCCTCCTTGTCCTGAATCTTGCTCTTCACGTT 1548246 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | || | |||| || ||| || || | ||| ||||| ||||| || ||||||||||| Sbjct 1548247 GTCGATAGTGTCACTGGACTCGACCTCAAGGGTGATGGTCTTTCCAGTAAGAGTCTTCAC 1548306 Query 34970 AAAGATCTGCATA 34982 ||| ||||||||| Sbjct 1548307 AAAAATCTGCATA 1548319 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| || || || || | || | || || ||||| || ||||| || Sbjct 1548866 TCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAG 1548925 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | ||||||||||| | || | |||||||| || |||||| |||||| Sbjct 1548926 ATCAAGCGTTGCTGGTCAGGAGGGATACCCTCCTTATCCTGAATCTTGGACTTGACGTTG 1548985 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | |||||| |||| ||| ||||| || || || || ||||| ||| Sbjct 1548986 TCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACA 1549045 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 1549046 AAGATCTGCAT 1549056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324630782991936