Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20udum_20[genbank_20GCA_5F002194535.1_202017-06-15] 712 sequences; 56,380,608 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq556 107 2e-18 >seq556 Length=5145791 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || || || || ||||| || | ||||| || | || Sbjct 1548546 ATGCAAATCTTCGTCAAGACCCTTACTGGAAAGACTATCACTTTGGAAGTCGAGTCATCC 1548487 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||||||||| || || || |||||||||||| Sbjct 1548486 GATACCATTGATAATGTGAAGAGCAAGATCCAAGACAAGGAGGGTATTCCTCCCGATCAA 1548427 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | ||||| || || || || || |||||| ||| | ||||| || ||| Sbjct 1548426 CAGCGACTCATCTTCGCTGGCAAGCAACTAGAGGATGGTCGAACTCTTTCAGACTACAAC 1548367 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || |||||||| || || |||||||| Sbjct 1548366 ATCCAGAAGGAATCTACTCTCCACTTGGT 1548338 Score = 100 bits (110), Expect = 3e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || ||||| || || || || ||||| || || | || Sbjct 1549056 ATGCAGATCTTTGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCTTCC 1548997 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || || || || || || ||||| || || Sbjct 1548996 GACACTATCGACAACGTCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCTCCTGACCAG 1548937 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||| |||||||| ||||| || ||||| ||||| | | | || ||||| ||| Sbjct 1548936 CAACGCTTGATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTCTCTGATTACAAC 1548877 Query 24884 ATTCAAAAGGAATCGACACTACA 24906 ||||| ||||| || || || || Sbjct 1548876 ATTCAGAAGGAGTCCACTCTGCA 1548854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449893595911360