Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20udum_20[genbank_20GCA_5F002194535.1_202017-06-15] 712 sequences; 56,380,608 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq667 84.2 5e-11 >seq667 Length=3682606 Score = 84.2 bits (92), Expect = 5e-11 Identities = 155/225 (69%), Gaps = 7/225 (3%) Strand=Plus/Minus Query 131785 ATTTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGAT---GATTC 131841 ||| |||||| | |||||| || || ||||| || |||||| |||||| || || Sbjct 2045514 ATTCCCTGCA-TCCGAAAGAAGGCTGACTGGGCCATCCGATGGATCCAAGATAAGGACTC 2045456 Query 131842 CGCTAATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGG 131901 | | ||| | | | || || || || ||| |||||||||||| ||||| || Sbjct 2045455 CTCC---TTTGCCCAACGTCTCGTTGCCTTCGCTGCTGTTGAAGGTATCTTCTTCAGCGG 2045399 Query 131902 TGCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTC 131961 ||| ||| ||||||| ||||| ||||||||||| | ||||| || || | || || Sbjct 2045398 TGCCTTCGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTC 2045339 Query 131962 CAATCAATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGC 132006 ||| | ||||||| | || || | | || ||||| ||||| Sbjct 2045338 CAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACTGACTTTGC 2045294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186801973300232