Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20udum_20[genbank_20GCA_5F002194535.1_202017-06-15] 712 sequences; 56,380,608 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq556 98.7 2e-15 >seq556 Length=5145791 Score = 98.7 bits (108), Expect = 2e-15 Identities = 155/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTC--TG 206230 ||||| ||| || || || || ||||| || ||||| | || || || || | || Sbjct 1548315 CAGATTTTTGTGAAGACTCTTACTGGAAAGACCATCACCCTTGAGGTCGA--GTCCAGTG 1548258 Query 206231 ACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTC 206290 |||| |||| || ||| |||||||| || || || || ||| || || | Sbjct 1548257 ACACTATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAGGGTATTCCCCCTGATCAGC 1548198 Query 206291 AAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 206350 | | ||||||||||| || |||||||| |||||||| | || ||| ||| |||||| Sbjct 1548197 AGCGTCTTATCTTCGCTGGTAAGCAGTTAGAAGATGGTCGCACCTTGAGCGACTACAACA 1548138 Query 206351 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||||| ||||| || || ||||| ||| | ||||||| Sbjct 1548137 TCCAGAAGGAGTCAACCCTCCACCTCGTTCTCCGACTTCG 1548098 Score = 86.0 bits (94), Expect = 1e-11 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || || || ||||| || |||||||||||||| || || || || | || Sbjct 1548532 CAAGACCCTTACTGGAAAGACTATCACTTTGGAAGTCGAGTCATCCGATACCATTGATAA 1548473 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||| ||||| || || || ||| || || || |||| ||||| Sbjct 1548472 TGTGAAGAGCAAGATCCAAGACAAGGAGGGTATTCCTCCCGATCAACAGCGACTCATCTT 1548413 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| || ||||| | || ||||| | ||| | | || |||||| ||||||| || || Sbjct 1548412 CGCTGGCAAGCAACTAGAGGATGGTCGAACTCTTTCAGACTACAACATCCAGAAGGAATC 1548353 Query 206364 TACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||| ||| | ||| | | ||||| Sbjct 1548352 TACTCTCCACTTGGTTCTCCGTCTTCG 1548326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181810018839752