Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20udum_20[genbank_20GCA_5F002194535.1_202017-06-15] 712 sequences; 56,380,608 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq556 114 1e-20 >seq556 Length=5145791 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||||||| | |||| | ||||| | ||| ||||| Sbjct 1548122 GTTGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCATCTTCTAACTGCTTACCA 1548181 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | || |||||||| ||||| || || | |||||| || || |||||| | ||| Sbjct 1548182 GCGAAGATAAGACGCTGCTGATCAGGGGGAATACCCTCCTTGTCCTGAATCTTGCTCTTC 1548241 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | |||||| ||| || || || || || || | || || || ||||| Sbjct 1548242 ACGTTGTCGATAGTGTCACTGGACTCGACCTCAAGGGTGATGGTCTTTCCAGTAAGAGTC 1548301 Query 27231 TTCACAAAGATTTGCATA 27248 |||||||| || |||||| Sbjct 1548302 TTCACAAAAATCTGCATA 1548319 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | ||||| || || || || |||||||| | | || | || || Sbjct 1548338 ACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAGTCTGAAAGAGTTCGACCATCCTCT 1548397 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 || || || || ||| | ||||| ||||||||||| || || | |||||| || || | Sbjct 1548398 AGTTGCTTGCCAGCGAAGATGAGTCGCTGTTGATCGGGAGGAATACCCTCCTTGTCTTGG 1548457 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| | |||| | || | || || | | || ||||| | ||| |||| || Sbjct 1548458 ATCTTGCTCTTCACATTATCAATGGTATCGGATGACTCGACTTCCAAAGTGATAGTCTTT 1548517 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || || || |||||||||||| Sbjct 1548518 CCAGTAAGGGTCTTGACGAAGATTTGCATA 1548547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424930712631744