Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20udum_20[genbank_20GCA_5F002194535.1_202017-06-15] 712 sequences; 56,380,608 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq667 113 1e-19 >seq667 Length=3682606 Score = 113 bits (124), Expect = 1e-19 Identities = 350/531 (66%), Gaps = 17/531 (3%) Strand=Plus/Minus Query 443349 GAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGAACGACTATCTAGCCATGAA 443408 |||||||||||||||||||| || | ||| |||||| | || || || |||| Sbjct 2045802 GAGGAGATTGATCTCTCCAAAGATCTCCACGACTGGAACAACCGCCTGACTGCTGATGAG 2045743 Query 443409 CGCGATTTCTTCAAATG---CATCTTGGCCTTCTTTGCACCGAGCGACGGTATCGTCGGT 443465 | | |||||| | |||| | || ||||| || | || ||||| ||| Sbjct 2045742 C---AGTTCTTCGTCTCTCACATCCTTGCTTTCTTCGCTGCCTCTGATGGTATTGTCAAC 2045686 Query 443466 GAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACACCGAGGCCCGCTACTTCTAC 443525 ||||| || || ||||||| | ||| | | ||||||| || | ||||||| Sbjct 2045685 GAGAACCTCGTCGAGCGTTTCAGTGGCGAGGTCCAGATCCCCGAGGCTCGTTGCTTCTAC 2045626 Query 443526 GCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTACAGTCAGTTGATCAAGACA 443585 | ||||| | ||||||||||||||| ||||| |||| | | ||| | || Sbjct 2045625 GGCTTCCAGATCATGATGGAGAACATTCACTCCGAGACCTACTCCCTCCTAATCGACAC- 2045567 Query 443586 CTAATTCCGAACGAAGACGAACAGCGGTCCATCTTCT-CATCGTTCAT---GACCACGCC 443641 ||| || || || || ||||| || | ||| || || ||| ||||| || Sbjct 2045566 CTACATC--AAGGAGCCCGCCCAGCGAACCTACCTCTTCAACGC-CATTGAGACCATTCC 2045510 Query 443642 AGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGGCTCGAACGAGAAAATCTCAGC-T 443700 ||||| | ||| || |||||| | | ||| || || || || ||| | | Sbjct 2045509 CTGCATCCGAAAGAAGGCTGACTGGGCCATCCGATGGATCCAA-GATAAGGACTCCTCCT 2045451 Query 443701 TCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTA 443760 | | | | || || || || || |||| || ||||| | || || ||||| || || Sbjct 2045450 TTGCCCAACGTCTCGTTGCCTTCGCTGCTGTTGAAGGTATCTTCTTCAGCGGT-GCCTTC 2045392 Query 443761 GCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAA 443820 ||||| ||||||||| | || |||||||| || |||| |||||||||||| ||||| Sbjct 2045391 GCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCCAACGAG 2045332 Query 443821 CTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTAC 443871 || ||| ||| ||||||||| | || ||||| ||||| || ||| || Sbjct 2045331 CTCATCTCTCGTGACGAGGGTCTTCACACTGACTTTGCCTGCCTCCTCCAC 2045281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588321510404840