Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680525.1_202016-07-06] 20,982 sequences; 49,446,642 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq3424 140 7e-28 seq592 87.8 4e-12 >seq3424 Length=5400 Score = 140 bits (154), Expect = 7e-28 Identities = 140/182 (77%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 230452 GGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTT 230511 ||||||||||| || || ||| ||||||||||| ||||| ||||||||| | | || Sbjct 4040 GGCATGAACGCCGACCTCATGAAGCAGTACATCGAGTTCGTCGCCGACCGCCTCCTCGTC 4099 Query 230512 GCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATT 230571 || || || ||||||| || ||||| | | |||||||| | || |||||| ||| Sbjct 4100 GCCCTCGGCAACGAGAAGGTCTACAAGGCCACCAACCCCTTCGACTTCATGGAGAACATC 4159 Query 230572 TCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGT 230631 || || || ||||||||||||||||| ||||||||| ||||||| |||| | ||||| Sbjct 4160 TCCCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAGAAGGCTGGT 4219 Query 230632 GT 230633 || Sbjct 4220 GT 4221 >seq592 Length=7392 Score = 87.8 bits (96), Expect = 4e-12 Identities = 199/289 (69%), Gaps = 8/289 (3%) Strand=Plus/Plus Query 282393 ACGATAGGTGTGATGAACTTCTTCAAGAAACCTGGAAT-TTCTAG-GAGACTGGGAAAAC 282450 ||||| || |||||||||| | |||||| | |||| ||| || ||||| ||||| Sbjct 5389 ACGATGGGAGTGATGAACTCTTGCAAGAAGTCCGGAACCTTCAAGAGAGAC-GGGAACTG 5447 Query 282451 AGCTATGGAAAAAGTTCATGACAAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGG 282510 || || | ||||| || | ||||| || ||| |||| || |||| || | Sbjct 5448 GACT-TGAAGGAAGTTGATCAGGAGACCCTTGATATGACTTCCATCGTGATCCTGATCAG 5506 Query 282511 TCATGATCATCACATGACCGTATCTCAGAGAAGAAGTGTCTTTGTACACTTTACCGGTTT 282570 |||||||||||| ||| ||||||| ||| |||||| ||||||| | | | Sbjct 5507 TCATGATCATCAGATGGCCGTATCGAAGACTCTTGGTGTCTGTGTACACCTGCTTGTGCT 5566 Query 282571 GAAGGCCCAAAATTTGTTTGA-GCGCGGTGATTTCTTCGTTCTTTGTGATACTTG-CCAC 282628 || |||| | || |||| | | | |||||| | |||||| ||||| || | | || Sbjct 5567 TCAGACCCAGGAACTGCTTGATGTTCTG-GATTTCCTGGTTCTTGGTGAT-CTGGTCGAC 5624 Query 282629 AGATGCATCGCGAACGTTCAGCAACTTACCGCGGAGAGGAAAAACACCA 282677 |||||||| ||||| |||| |||||| ||||| || || |||||| Sbjct 5625 GCTGGCATCGCGGACGTTGAGCATCTTACCACGGAGTGGGAAGACACCA 5673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057539623190660