Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680525.1_202016-07-06]
20,982 sequences; 49,446,642 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq3424 120 3e-22
>seq3424
Length=5400
Score = 120 bits (132), Expect = 3e-22
Identities = 369/566 (65%), Gaps = 15/566 (3%)
Strand=Plus/Minus
Query 16961 AGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTC 17020
|| ||||| || ||| || | |||||||| | ||| || ||||| ||||| |||
Sbjct 3924 AGGCATGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTC 3865
Query 17021 AACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAG 17080
| || ||||| || || ||||| | ||| || || | ||| || | || |||
Sbjct 3864 AGGCCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAG 3805
Query 17081 AATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTA 17140
|| ||||||||||||| ||||| |||| | || | || | | || || ||||
Sbjct 3804 AAGATACCCTCGACGGCAGCAAAGGCGACGAGACGCTGAGCAAAGGACGAGTTCTTGTCC 3745
Query 17141 CGAATCCATTTCTGCACCCACTCGGCTTT-TTGCTTTATGCAATCCATCGTTTCTATGGC 17199
| |||||| |||| ||||| || |||| || || || || || |||||
Sbjct 3744 TGGATCCATCGGATGGCCCAGTCGGCCTTCTTGCGG-ATACAGGGGATGGTCTCAATGGC 3686
Query 17200 CTTAAATAATTTC--TCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTG 17257
|| || | | || || ||| | || | || || || || ||||| || |
Sbjct 3685 GTTGAAGAGGTAGGTTCGTTGAGCTG--GCTCCTTGATGTAGGTGTCAATGAGGAGCGAG 3628
Query 17258 TACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCC 17317
|| | |||||||| ||||||||||| ||||| || ||||| ||||||||||| ||
Sbjct 3627 TAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGGGCCTCG 3568
Query 17318 GCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTC 17377
| || || || || || |||||| || | || || ||||| |||||||||||
Sbjct 3567 GGGATCTGGACCTCGCCGCTGAATCGCTCGACAAGGTTCTCGTTGACGATGCCGTCAGAG 3508
Query 17378 GCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCG- 17436
|| ||||| || || | || || | ||| | | ||||| | || || |||
Sbjct 3507 GCAGCGAAGAAGGCGAGGATGTGGGAGACGAAGAACTGCTCGTCGGCAGTCAG---GCGG 3451
Query 17437 -----CCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCC 17491
|||||| | | ||| ||||||| ||| | || |||| ||||| ||| |||
Sbjct 3450 TTGTTCCAGTCGTGGAGATCCTTGGATAGATCAATCTCCTCGGCAGTCCAGAAAGAGGCC 3391
Query 17492 ACTGCCTTTTTATACATATTCCAAAT 17517
| ||||| || ||||| | ||| ||
Sbjct 3390 TCGGCCTTCTTGTACATCTGCCAGAT 3365
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517409860727760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |