Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680525.1_202016-07-06] 20,982 sequences; 49,446,642 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq3424 120 3e-22 >seq3424 Length=5400 Score = 120 bits (132), Expect = 3e-22 Identities = 369/566 (65%), Gaps = 15/566 (3%) Strand=Plus/Minus Query 16961 AGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTC 17020 || ||||| || ||| || | |||||||| | ||| || ||||| ||||| ||| Sbjct 3924 AGGCATGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTC 3865 Query 17021 AACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAG 17080 | || ||||| || || ||||| | ||| || || | ||| || | || ||| Sbjct 3864 AGGCCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAG 3805 Query 17081 AATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTA 17140 || ||||||||||||| ||||| |||| | || | || | | || || |||| Sbjct 3804 AAGATACCCTCGACGGCAGCAAAGGCGACGAGACGCTGAGCAAAGGACGAGTTCTTGTCC 3745 Query 17141 CGAATCCATTTCTGCACCCACTCGGCTTT-TTGCTTTATGCAATCCATCGTTTCTATGGC 17199 | |||||| |||| ||||| || |||| || || || || || ||||| Sbjct 3744 TGGATCCATCGGATGGCCCAGTCGGCCTTCTTGCGG-ATACAGGGGATGGTCTCAATGGC 3686 Query 17200 CTTAAATAATTTC--TCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTG 17257 || || | | || || ||| | || | || || || || ||||| || | Sbjct 3685 GTTGAAGAGGTAGGTTCGTTGAGCTG--GCTCCTTGATGTAGGTGTCAATGAGGAGCGAG 3628 Query 17258 TACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCC 17317 || | |||||||| ||||||||||| ||||| || ||||| ||||||||||| || Sbjct 3627 TAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGGGCCTCG 3568 Query 17318 GCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTC 17377 | || || || || || |||||| || | || || ||||| ||||||||||| Sbjct 3567 GGGATCTGGACCTCGCCGCTGAATCGCTCGACAAGGTTCTCGTTGACGATGCCGTCAGAG 3508 Query 17378 GCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCG- 17436 || ||||| || || | || || | ||| | | ||||| | || || ||| Sbjct 3507 GCAGCGAAGAAGGCGAGGATGTGGGAGACGAAGAACTGCTCGTCGGCAGTCAG---GCGG 3451 Query 17437 -----CCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCC 17491 |||||| | | ||| ||||||| ||| | || |||| ||||| ||| ||| Sbjct 3450 TTGTTCCAGTCGTGGAGATCCTTGGATAGATCAATCTCCTCGGCAGTCCAGAAAGAGGCC 3391 Query 17492 ACTGCCTTTTTATACATATTCCAAAT 17517 | ||||| || ||||| | ||| || Sbjct 3390 TCGGCCTTCTTGTACATCTGCCAGAT 3365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517409860727760