Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680525.1_202016-07-06]
20,982 sequences; 49,446,642 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq8234 123 3e-23
seq5316 91.5 2e-13
>seq8234
Length=1651
Score = 123 bits (136), Expect = 3e-23
Identities = 217/312 (70%), Gaps = 7/312 (2%)
Strand=Plus/Minus
Query 145545 CATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCCGCCCT 145604
||||| ||| | |||| | ||| |||| ||||||| | |||| ||||||||| |
Sbjct 630 CATCTTCATTGCAATGGTCTTGTGAGGGTCATAGCCCTTGATAACAAAATCCTCCGCCTT 571
Query 145605 GAAGTCATCTATGTCCTCCACCCGCCTCAGGA----TCCTGAGCCTGGGAAAGGGCCGGG 145660
| | || ||| | ||| ||| ||| || || ||| |||||| ||||
Sbjct 570 CCACCCGTCGATG-CTTCCGCCCTTCTCTCGAGTAATCTCCAGCTCTGGAAAGTCACGGG 512
Query 145661 GGCTCCTGGTCA-GCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCC 145719
| ||| | ||| |||| || || | |||||||||| ||||||||||||||| ||
Sbjct 511 G-CTCGCGCTCAAGCTGCGTGTTGAGAGCATCCACGTGGTCGAGGTAGACGTGCGCATCG 453
Query 145720 CCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTC 145779
|||| |||||| ||| | || ||| | | | || ||| || | ||||| |||
Sbjct 452 CCCATGACGTGAGTGAGGCTGCCAGGCACCAATTCGCAGACGTGCGCCATCATGTGTGTC 393
Query 145780 AGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGG 145839
||||| | ||||||||| |||||||| || || || || |||||||| | || ||||||
Sbjct 392 AGCAGTGCGTAGCTGGCAATGTTGAACGGGACGCCGAGACCCATGTCGCAGGATCGCTGG 333
Query 145840 TACAGCTGGCAG 145851
|| || ||||||
Sbjct 332 TAGAGTTGGCAG 321
>seq5316
Length=3660
Score = 91.5 bits (100), Expect = 2e-13
Identities = 110/146 (75%), Gaps = 4/146 (3%)
Strand=Plus/Minus
Query 146123 CGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCGGAGAGCTC 146180
||||||| || ||||| || ||| ||||||||||||||| ||| |||||| ||| |||
Sbjct 3635 CGAGGAACTCGCGGGAGCCATTGCCGTCCCAGATCTTGATGCCGGCCTCGCTGAG-GCT- 3578
Query 146181 ATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAA 146240
||||| ||| ||| |||||||||||| ||||| ||| ||| | | |||
Sbjct 3577 GGTGGAGGATGTGTTGCCCTCGATGAACCAGAGGAGCTCGGCGATGACGGCGCGGGTGAA 3518
Query 146241 GACCCTCTTGGTGGTCAGCAGGGGGA 146266
||| | ||||||||| || |||||||
Sbjct 3517 GACGCGCTTGGTGGTGAGGAGGGGGA 3492
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589922037607280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |