Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680525.1_202016-07-06] 20,982 sequences; 49,446,642 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq8234 123 3e-23 seq5316 91.5 2e-13 >seq8234 Length=1651 Score = 123 bits (136), Expect = 3e-23 Identities = 217/312 (70%), Gaps = 7/312 (2%) Strand=Plus/Minus Query 145545 CATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCCGCCCT 145604 ||||| ||| | |||| | ||| |||| ||||||| | |||| ||||||||| | Sbjct 630 CATCTTCATTGCAATGGTCTTGTGAGGGTCATAGCCCTTGATAACAAAATCCTCCGCCTT 571 Query 145605 GAAGTCATCTATGTCCTCCACCCGCCTCAGGA----TCCTGAGCCTGGGAAAGGGCCGGG 145660 | | || ||| | ||| ||| ||| || || ||| |||||| |||| Sbjct 570 CCACCCGTCGATG-CTTCCGCCCTTCTCTCGAGTAATCTCCAGCTCTGGAAAGTCACGGG 512 Query 145661 GGCTCCTGGTCA-GCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCC 145719 | ||| | ||| |||| || || | |||||||||| ||||||||||||||| || Sbjct 511 G-CTCGCGCTCAAGCTGCGTGTTGAGAGCATCCACGTGGTCGAGGTAGACGTGCGCATCG 453 Query 145720 CCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTC 145779 |||| |||||| ||| | || ||| | | | || ||| || | ||||| ||| Sbjct 452 CCCATGACGTGAGTGAGGCTGCCAGGCACCAATTCGCAGACGTGCGCCATCATGTGTGTC 393 Query 145780 AGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGG 145839 ||||| | ||||||||| |||||||| || || || || |||||||| | || |||||| Sbjct 392 AGCAGTGCGTAGCTGGCAATGTTGAACGGGACGCCGAGACCCATGTCGCAGGATCGCTGG 333 Query 145840 TACAGCTGGCAG 145851 || || |||||| Sbjct 332 TAGAGTTGGCAG 321 >seq5316 Length=3660 Score = 91.5 bits (100), Expect = 2e-13 Identities = 110/146 (75%), Gaps = 4/146 (3%) Strand=Plus/Minus Query 146123 CGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCGGAGAGCTC 146180 ||||||| || ||||| || ||| ||||||||||||||| ||| |||||| ||| ||| Sbjct 3635 CGAGGAACTCGCGGGAGCCATTGCCGTCCCAGATCTTGATGCCGGCCTCGCTGAG-GCT- 3578 Query 146181 ATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAA 146240 ||||| ||| ||| |||||||||||| ||||| ||| ||| | | ||| Sbjct 3577 GGTGGAGGATGTGTTGCCCTCGATGAACCAGAGGAGCTCGGCGATGACGGCGCGGGTGAA 3518 Query 146241 GACCCTCTTGGTGGTCAGCAGGGGGA 146266 ||| | ||||||||| || ||||||| Sbjct 3517 GACGCGCTTGGTGGTGAGGAGGGGGA 3492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589922037607280