Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680525.1_202016-07-06] 20,982 sequences; 49,446,642 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq20342 100 2e-16 seq2352 98.7 8e-16 seq7999 84.2 2e-11 >seq20342 Length=208 Score = 100 bits (110), Expect = 2e-16 Identities = 138/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 20983 ACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCAT 21042 ||||||| || ||||| |||||||||||||| || ||||||||||||| ||||| || Sbjct 1 ACTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGA 60 Query 21043 AAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCT 21102 | || || | |||||||||| || | ||| |||||||| ||||| ||||| | Sbjct 61 AGATCAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTCACAT 120 Query 21103 GGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGA 21162 ||| || || | |||| || | ||| |||||||| || || | || || | Sbjct 121 TCTCGATGGTGTCCGAAGACTCCACCTCGAGGGTGATGGTCTTACCCGTGAGGGTCTTCA 180 Query 21163 CAAATATTTGCAT 21175 | || |||||||| Sbjct 181 CGAAGATTTGCAT 193 >seq2352 Length=6378 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | || |||| |||| ||| |||||||| || ||||| ||||| Sbjct 1366 CCACCGCGCAGACGAAGAACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTG 1425 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || ||| || ||||||| ||||| ||||| ||| | || |||| ||| || || || Sbjct 1426 AGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGTCGCTGTTGATCAGGAGGA 1485 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| |||||| |||||| | | | | || || | ||| Sbjct 1486 ATGCCTTCCTTGTCCTGGATCTTCGATTTCACATTGTCAATGGTGTCGGACGATTCCACC 1545 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| || ||||| ||||| | || ||||| || || ||||| Sbjct 1546 TCAAGGGTGATAGTCTTTCCGGTGAGGGTCTTGACGAAGATCTGCAT 1592 >seq7999 Length=1671 Score = 84.2 bits (92), Expect = 2e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 20986 CCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAA 21045 |||| || ||||| ||||| | |||||| || | ||||||||||| ||||| || | | Sbjct 349 CCTTCTGGATGTTGTAGTCGGAAAGGGTTCGGCCATCCTCCAGCTGCTTGCCAGCGAAGA 290 Query 21046 TAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTT 21091 | |||| |||||||||| ||| | ||| |||||||| |||||| Sbjct 289 TCAGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTT 244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422151220669112