Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680525.1_202016-07-06]
20,982 sequences; 49,446,642 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq3424 95.1 9e-15
>seq3424
Length=5400
Score = 95.1 bits (104), Expect = 9e-15
Identities = 291/448 (65%), Gaps = 14/448 (3%)
Strand=Plus/Plus
Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATA 22800
|||||| | |||||||| || || || || || | || || | ||||| ||||
Sbjct 3770 CGTCTCGTCGCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATC 3829
Query 22801 TTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGC 22860
|||||||| ||||| ||| |||||||| || || | |||||||||||| | ||
Sbjct 3830 TTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTTTCCAACGAGCTCATCTCT 3889
Query 22861 CGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCA-AACAA 22919
|||||||| ||||| ||| |||||||| || | || | | | || |||
Sbjct 3890 CGTGACGAGGGTCTTCACACCGACTTTGCATGCCTCCT-------CCACTCCCACCTCAA 3942
Query 22920 --ACCGTGTCAGGACGATGCACATC----AAATCATATCTGATGCCGTTGACATTGAGAC 22973
||||| ||| | | | |||| | ||||| | |||||||| |||||||
Sbjct 3943 GGGCCGTGCCAGCAAGCAGGTCATCCAGGACATCATCACCGATGCCGTCACCATTGAGCA 4002
Query 22974 GGCTTTCTTCCAAGAGGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAG 23033
|| ||| | ||||| || |||| || || ||||| ||| ||||
Sbjct 4003 GGAGTTCCTGACCGAGGCCCTCCCCTGCGCCCTGCTCGGCATGAACGCCGACCTCATGAA 4062
Query 23034 ACTGTACATACAGTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTA 23093
| |||||| |||| || || || ||||| |||| ||||| || | | ||| | ||
Sbjct 4063 GCAGTACATCGAGTTCGTCGCCGACCGCCTCCTCGTCGCCCTCGGCAACGAGAAGGTCTA 4122
Query 23094 TAACGTTGCCAATCCATTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTT 23153
|| | |||| || || || |||||||| ||||| | | | || || || |||||
Sbjct 4123 CAAGGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTT 4182
Query 23154 CTTTGAACGCCGTGTGAGTGAATATCAG 23181
||| || ||||| |||| || |||
Sbjct 4183 CTTCGAGAAGCGTGTCGGTGACTACCAG 4210
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356142504611746
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |