Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680525.1_202016-07-06]
20,982 sequences; 49,446,642 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq6553 390 3e-103
>seq6553
Length=2786
Score = 390 bits (432), Expect = 3e-103
Identities = 1080/1632 (66%), Gaps = 38/1632 (2%)
Strand=Plus/Plus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
||||| || ||| | || || | | ||||||||| |||| | || ||| |||| ||
Sbjct 1140 TTCACCCATGCCTCCCCCACCCTCTTCAATGCTGGTACTCCCCAGCCTCAGCTGTCCTCA 1199
Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666
||||| || | | ||||| || || ||| |||||||| | ||| || || ||||
Sbjct 1200 TGCTTCCTGGTCGACATGAAAGAGGACAGCATTGAGGGTATTTATGATACTCTCAAGACC 1259
Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC 363725
||||| | || ||||||| || || || || || | | || ||||| | |||||
Sbjct 1260 TGTGCCATGATCTCCAAGATGGCGGGTGGTATCGGCCTGAACG-TCCACCGAATCCGTGC 1318
Query 363726 -ACAGAACAGTTACATTCGC-GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTT 363783
|| | | |||||| ||| || || || ||| || || | |||||||||
Sbjct 1319 CACTGG-CTCTTACAT-CGCTGGTACCAACGGTACCTCCAACGGTGTCACCCCCATGCTT 1376
Query 363784 CGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCG 363843
||||| || |||| ||||| ||||||||||||||||||| ||||| || ||
Sbjct 1377 CGTGTCTTCAACAACACTGCCCGGTACGTCGACCAGGGTGGCAACAAGCGACCTGGTGCC 1436
Query 363844 TTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAA 363903
||||| || || || ||||| || || ||| | |||||||| ||||| || || ||
Sbjct 1437 TTTGCCATCTACCTTGAGCCCTGGCACGCAGATGTCTTTGAGTTCCTTGACCTGCGCAAG 1496
Query 363904 AACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGAC 363963
||| || || ||||| | || || || || |||||| || || ||| || | ||
Sbjct 1497 AACCACGGCAAGGAGGAGGTCCGCGCCCGCGACCTGTTCCTGGCTCTCTGGATTCCCGAT 1556
Query 363964 CATTTTATGAAGCGCGTGGAGGCAGGTAAGA--ATTGGTCACTCTTTTGCCCACACGAAT 364021
| || |||||||| || ||| | | | | | ||| | ||| | || || |||| |
Sbjct 1557 CTCTTCATGAAGCGTGTCGAG--AAGAACGGTGACTGGACCCTCATGTGTCCCAACGAGT 1614
Query 364022 GTCCAGGTCTTTCCGA-TG-TATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGA 364079
| || ||||| |||| || ||||| | | || | | ||||| ||||||||||||||
Sbjct 1615 GCCCCGGTCTGGCCGACTGCTATGGCGAG--GAGTTCGAGGCTCTTTACGAAAAGTATGA 1672
Query 364080 ATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGA 364139
|| ||| |||| ||| ||||| || || |||||||| |||| ||||||| | ||
Sbjct 1673 GAAGGCGGGCAAGGGTCGCAAGACCATGAAGGCCCAGAAGCTCTGGTATGCCATCCTCGA 1732
Query 364140 TTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTC 364199
|||||| ||||| || | |||| ||| | ||||| || ||||||||||||
Sbjct 1733 GGCGCAGACCGAGACCGGCAACCCCTTCATGCTCTACAAGGACCACTGCAACCGCAAGAG 1792
Query 364200 CAACCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAAT 364258
||||||| || |||| || || | || | || ||| || || ||||||||||| || |
Sbjct 1793 CAACCAGAAGAACCTGGGCACCA-TCCGTAGCTCCAATCTCTGCACCGAGATTATCGAGT 1851
Query 364259 ACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTG 364318
|| ||| || || ||| ||| || || |||||||| || | || || || ||||
Sbjct 1852 ACTGCGCCCCTGATGAGGTTGCTGTCTGCAACCTTGCTTCTCTGGCCCTGCCTTCGTTCA 1911
Query 364319 TAA---AAGATGGTACT---TTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTA 364372
| | | |||| | || | |||| |||| | | | ||||| || | ||
Sbjct 1912 TCAACTACGATGATGCTTGCTATGACTTCCAGAAGTTGCACGACGTCACACAGGTTGTCG 1971
Query 364373 CTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG----A 364427
| |||| || ||| | |||||||| ||| | || || || | ||||| || |
Sbjct 1972 TTCGCAACCTGAACAGGATTATCGACGTGAACCACTACCCTGTTACGGAAGCTCGCAACA 2031
Query 364428 GCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTT 364487
|| || ||||| || || || |||||| ||||||| ||||| || ||||| | |||
Sbjct 2032 GC-----AACATGCGACACCGACCCATTGGTGTTGGTGTCCAGGGTCTTGCTGATGCTTT 2086
Query 364488 TATGATGCTC--AAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATC 364545
| ||||| ||| | || || || || || ||||||| || || ||| |||||
Sbjct 2087 CCT--TGCTCTGCGCATGCCTTTCGAGTCTCCCGAGGCTCGTGAGCTCAACAAGCAGATC 2144
Query 364546 TTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTG-ATTTGGCAAAAACCAAGGG 364604
|| || || || || ||| || | ||||||||| ||| | |||| || ||||
Sbjct 2145 TTCGAGACCATCTACCATGCTGCCCTCACTGCTTCG-GTGCAGCTGGCCAAGGAGGAGGG 2203
Query 364605 AAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATG 364664
||||| || | |||| || || || |||| | ||||||| || | ||
Sbjct 2204 TCCCTACTCCACCTTCAAGGGCTCTCCCGCCTCTGAGGGTATTCTCCAGTTCGACATGTG 2263
Query 364665 GAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCA 364724
|||||| | ||| |||| || ||| ||||||| | || | | || ||| ||||
Sbjct 2264 GAATGTGAAGCCTTCTGACCTCTGGGACTGGGAGAACCTCAGGGAGCAGGTCAAGGAGCA 2323
Query 364725 TGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCT 364784
|| | ||||||| || | || || ||||| || || |||| | ||||||||
Sbjct 2324 CGGCATTCGCAACAGTCTGCTGCTTGCCCCTATGCCTACTGCCAGTACTTCGCAGATCCT 2383
Query 364785 CGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTC 364844
|| ||||||||||||||||| || | || ||| | || ||||| || || |
Sbjct 2384 GGGCAACAACGAGTGCTTCGAGCCTTACACCTCCAACATCTACCAGCGCCGTGTCCTCGC 2443
Query 364845 CGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTG 364904
|| || || | ||| || || | || ||||||| ||| ||| || |||||
Sbjct 2444 TGGCGAGTTCCAGGTCGTCAACCCCTGGCTGCTCAAGGACCTTGTTGACATGGGCCTGTG 2503
Query 364905 GGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGG 364964
| || |||||| ||| ||||| |||| || ||||| | |||||||| ||
Sbjct 2504 GTCGGATGCCATGAAAAACCGAATCATTGCCGAGAACGGTTCCATCCAGAACATCCCCAA 2563
Query 364965 ATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCT 365024
| || | || | ||| | | ||||| ||||| ||||| ||||| ||| |
Sbjct 2564 CATCCCCGCCGAGGTCAAGGCCCTCTACAAGACCGTCTGGGAGATTTCGCAGCGCCAGGT 2623
Query 365025 CATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATT 365084
| || | ||||| ||||| || ||||| || || |||| |||||| | ||| |
Sbjct 2624 CGTTCAGATGGCTGCCGACCGAGGTGCCTTCATTGATCAGTCCCAGTCCCTCAACATCCA 2683
Query 365085 CATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGG 365144
||||| | || ||| | |||| | || |||||| || ||| ||||| |||
Sbjct 2684 CATGAAGGACCCCACCATGGGCAAGATCACCAGCATGCACTTTGCCGGCTGGAAGCTCGG 2743
Query 365145 TCTTAAGACAGG 365156
|| ||||| ||
Sbjct 2744 CCTGAAGACGGG 2755
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303003217007924
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |