Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680525.1_202016-07-06] 20,982 sequences; 49,446,642 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq6553 197 1e-45 seq20342 122 8e-23 seq2352 113 4e-20 seq1107 113 4e-20 seq7999 98.7 9e-16 >seq6553 Length=2786 Score = 197 bits (218), Expect = 1e-45 Identities = 920/1441 (64%), Gaps = 37/1441 (3%) Strand=Plus/Minus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||||||||| |||||||| || | ||||| ||| || | ||| || ||| | || Sbjct 2464 TTGACGACCTGGAACTCGCCAGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAGGC 2405 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || ||||||| ||||||||||| || | || | || || ||||| || | | Sbjct 2404 TCGAAGCACTCGTTGTTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCAAGC 2345 Query 145178 A--ATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCC 145235 | | | || ||||| | |||||||| ||||| | ||| | || | |||| |||| Sbjct 2344 AGCAGACTG--TTGCGAATGCCGTGCTCCTTGACCTGCTCCCTGAGGTTCTCCCAGTCCC 2287 Query 145236 ATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGC 145295 | || || ||| |||| | |||||||||| |||| | ||| ||||| |||||| Sbjct 2286 AGAGGTCAGAAGGCTTCACATTCCACATGTCGAACTGGAGAATACCCTCAGAGGCGGGAG 2227 Query 145296 TGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAAC-TCGCCTCCAGA 145354 ||| | |||| ||| ||| ||||| |||| ||| | || || Sbjct 2226 AGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCCAGCT-GCACCGAAGCAGTGAGG 2168 Query 145355 GCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCG 145414 || | || || |||||| || ||| |||||||| || || |||| Sbjct 2167 GCAGCATGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGAGACTCG 2108 Query 145415 TACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGC 145474 | ||||||||||| | |||||||| || || ||||| | || || || ||||| Sbjct 2107 AAAGGCATGCGCAGAGCAAGGAAAGCATCAGCAAGACCCTGGACACCAACACCAATGGGT 2048 Query 145475 CGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAATT 145534 || ||| ||||||||| | | || | | ||| || | || ||||||||| Sbjct 2047 CGGTGTCGCATGTTGCTGTTGCGAGCTTCCGTAACAGGGTAGTGGTTCACGTCGATAATC 1988 Query 145535 TTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCGA 145594 | |||| ||| || || || |||| ||| | || ||||||| | |||||| | | | Sbjct 1987 CTGTTCAGGTTGCGAACGACAACCTGTGTGACGTCGTGCAACTTCTGGAAGTCATAGCAA 1928 Query 145595 GCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCCGTC 145654 || || || | | | | | ||| | || || | || || || || | Sbjct 1927 GCATCATCGTAGTTGATGAACGAAGGCAGGGCCAGAGAAGCAAGGTTGCAGACAGCAACC 1868 Query 145655 TCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATT---GCTACATTTGATGGTT 145711 || || | | ||| ||| | | ||||||| ||| | ||| ||||| |||||| Sbjct 1867 TCATCAGGGGCGCAGTACTCGATAATCTCGGTGCAGAGATTGGAGCTAC---GGATGGTG 1811 Query 145712 CCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCG 145771 ||||| || | ||| || || || | |||||| |||||||||||||||| | || | Sbjct 1810 CCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTG 1751 Query 145772 CCAGTCTCCACCTGCGTCTCCACGAT---AAAACGGTGCAAGTCCTGCGCACGCACCTGC 145828 || ||||| ||||| ||| | ||| | | | | || | ||| || || || Sbjct 1750 CCGGTCTCGGTCTGCGCCTCGAGGATGGCATACCAGAGC---TTCTGGGCCTTCA--TGG 1696 Query 145829 TGCTGGTAGC--GGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGT 145886 | || | | |||| | | || || || ||| || |||| ||| | || | Sbjct 1695 TCTTGCGACCCTTGCCCGCCTTCTCATACTTTTCGTAAAGAGCCTCGAACTCCTCGCCAT 1636 Query 145887 AGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGT 145946 |||| |||| ||| ||||| |||| |||||||||||| || | ||| | ||||| | Sbjct 1635 AGCAGTCGGCCAGACCGGGGCACTCGTTGGGACACATGAGGGTCCAGTCACCGTTCTTCT 1576 Query 145947 TGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGC 146006 ||| |||| ||| || | ||| || | ||| || || | || |||||| || | Sbjct 1575 CGACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCCAGGAACAGGTCGCGGGCGCGGA 1516 Query 146007 AATCCTCAGCACCCATGTT-TCGCTTCAAATTAAGCACACT-ATAGATGTCCGCGTGCCA 146064 ||||| || ||| | || || | ||| | ||| | ||| || |||||||| Sbjct 1515 CCTCCTCCTTGCCGTGGTTCTTGC-GCAGGTCAAGGA-ACTCAAAGACATCTGCGTGCCA 1458 Query 146065 CGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGTGACG 146121 || |||| |||| ||| | ||| || ||| |||||||||||||| |||| || Sbjct 1457 GGGCTCAAGGTAGATGGCAAAGGCACCAGGTCGCTTGTTGCCACCCTGGTCGACGTACCG 1398 Query 146122 TACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGTAGA 146181 | ||||||| ||||| || | |||||| ||| ||| ||| ||||| ||| Sbjct 1397 GGCAGTGTTGTTGAAGACACGAAGCATGGGGGTGACACCGTTGGAGGTACCGTTGGTACC 1338 Query 146182 GTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACC-GCCGCCGT 146240 || | ||| || || | | || || |||| ||||| ||| ||||| | Sbjct 1337 AGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGACGTTCAGGCCGATACCACCCGCCAT 1278 Query 146241 ACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATCGCTTC 146300 |||||| || ||| ||| ||| || || || || || |||||||| || | Sbjct 1277 -CTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATACCCTCAATGCTGTCCTCTT 1219 Query 146301 GAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAGAACAACG 146360 ||| ||| ||| ||||| ||| ||| ||| | | || || || || ||| | | Sbjct 1218 TCATGTCGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGAGTACCAGCATTGAAGAGGG 1159 Query 146361 TCGGGCTCGCGTGCGTAAACATTTTTCGGCTCATCATCCG---ATACGTTTCGATAGCGT 146417 | ||| || || || || | ||| |||| |||| | || || || | | Sbjct 1158 TGGGGGAGGCATGGGTGAAGAATTT---GCTCGACATCAGGTTGTAGGTCTCCAGGACAC 1102 Query 146418 CTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGCCGCT 146477 | ||| ||||| || ||||| | || || ||||||| |||||| ||||| |||| Sbjct 1101 GCTCAATATCGTCACCCCAGATGCCGACAGACACACGCATGATCATGTGCTGGGGACGCT 1042 Query 146478 C 146478 | Sbjct 1041 C 1041 >seq20342 Length=208 Score = 122 bits (134), Expect = 8e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 131042 ACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGT 131101 ||||||| || |||||||| || || |||||| |||||| ||||||||||| ||| Sbjct 1 ACTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGA 60 Query 131102 AGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCT 131161 |||| | ||||||||||||||||||||| || || ||||| || || ||| | | Sbjct 61 AGATCAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTCACAT 120 Query 131162 GCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTA 131221 ||| | || || | ||||| | |||| ||| | ||| ||||| || || || || | Sbjct 121 TCTCGATGGTGTCCGAAGACTCCACCTCGAGGGTGATGGTCTTACCCGTGAGGGTCTTCA 180 Query 131222 CGAAAATCTGCATGACT 131238 |||| || |||||| || Sbjct 181 CGAAGATTTGCATGGCT 197 >seq2352 Length=6378 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| || || | ||| | |||||||||||| || |||||||| ||| | Sbjct 1138 CCGCCACGGAGACGGAGAACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 1197 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||| || |||||||| || || |||| | ||||||||||| || ||| Sbjct 1198 AGGGTGCGACCGTCTTCCAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCAGGGGGG 1257 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||| | | || | |||||| | ||||||| Sbjct 1258 ATGCCCTCCTTGTCCTGAATCTTGGACTTCACGTTGTCAATGGTATCGCTCGACTCGACC 1317 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || ||||| || || || |||||||| Sbjct 1318 TCCAGAGTGATGGTCTTTCCAGTGAGAGTCTTGACAAAGATCTGCAT 1364 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||||| ||| || || | || | ||||||||||| || |||||||| ||||| Sbjct 1366 CCACCGCGCAGACGAAGAACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTG 1425 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||| ||||||||||| || |||| | ||||| || || ||||| Sbjct 1426 AGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGTCGCTGTTGATCAGGAGGA 1485 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| ||| || | | || | || |||| || || | Sbjct 1486 ATGCCTTCCTTGTCCTGGATCTTCGATTTCACATTGTCAATGGTGTCGGACGATTCCACC 1545 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | || || ||||| || || || ||||| |||||||| Sbjct 1546 TCAAGGGTGATAGTCTTTCCGGTGAGGGTCTTGACGAAGATCTGCAT 1592 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | || || || | || | |||||||||||| || |||||||||||| Sbjct 1868 GCCACCACGAAGGCGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCGGA 1927 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||| ||||| ||||||||||| ||| | || | ||||||||||| || || Sbjct 1928 GAGAGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGGGG 1987 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| || ||| ||||| | || | ||||| | |||||||| Sbjct 1988 GATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTATCCGAGGACTCGAC 2047 Query 131187 GTCGACGGTAACGGTTTTACCGGT 131210 |||| ||||| ||| || || || Sbjct 2048 CTCGAGGGTAATGGTCTTGCCCGT 2071 Score = 89.7 bits (98), Expect = 5e-13 Identities = 132/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || |||||||| ||||| ||||| ||| | ||| || ||||| ||||||||||| Sbjct 1624 GTTGACTCCTTCTGAATATTGTAGTCGGCGAGGGTTCGGCCATCCTCAAGCTGCTTGCCG 1683 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| | || | ||||||||||| ||||| || || || || || ||| ||| |||| Sbjct 1684 GCGAAAATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTATCTTGGATCTTCGACTTG 1743 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | || |||| ||||| | |||| ||| | || ||||| || || || Sbjct 1744 ACGTTGTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCAGTGAGGGTC 1803 Query 131218 TTTACGA 131224 || |||| Sbjct 1804 TTGACGA 1810 >seq1107 Length=10776 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || || || | || | ||| |||||| || |||||||| |||||| Sbjct 5577 CCACCACGCAGGCGGAGGACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 5518 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| || |||| | ||||||||||| || ||| Sbjct 5517 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCGGGGGGG 5458 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || |||| ||||| | Sbjct 5457 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 5398 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | || || || || || || || || || |||||||| Sbjct 5397 TCGAGGGTGATTGTCTTCCCCGTGAGGGTCTTGACAAAGATCTGCAT 5351 >seq7999 Length=1671 Score = 98.7 bits (108), Expect = 9e-16 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||| | ||| || ||||| ||||||||||| ||| ||| Sbjct 349 CCTTCTGGATGTTGTAGTCGGAAAGGGTTCGGCCATCCTCCAGCTGCTTGCCAGCGAAGA 290 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | |||||||||||||| ||||| || || ||||| ||| || ||||| | | Sbjct 289 TCAGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 230 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || || | |||||||| |||| ||| | ||| || || || || || || |||| Sbjct 229 CAATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 170 Query 131225 AA 131226 || Sbjct 169 AA 168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471889002842880