Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680525.1_202016-07-06]
20,982 sequences; 49,446,642 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq9 140 2e-28
seq18504 116 2e-21
>seq9
Length=3953
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 463 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 404
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 403 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 369
>seq18504
Length=212
Score = 116 bits (128), Expect = 2e-21
Identities = 79/89 (89%), Gaps = 5/89 (6%)
Strand=Plus/Minus
Query 25908 GTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAATCC 25962
||||| |||||| || |||||||||||||||||||||| || ||||||||||||||
Sbjct 210 GTTCCGTTGGCTTTGATTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCC 151
Query 25963 TTTCATGCGCGTCACTAATTAGATGACGA 25991
||||||||||||||||||||||||||||
Sbjct 150 ATTCATGCGCGTCACTAATTAGATGACGA 122
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334861547930042
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |