Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680525.1_202016-07-06] 20,982 sequences; 49,446,642 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq6553 493 2e-134 seq3424 396 5e-105 >seq6553 Length=2786 Score = 493 bits (546), Expect = 2e-134 Identities = 1162/1733 (67%), Gaps = 41/1733 (2%) Strand=Plus/Minus Query 243874 GAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGAG 243933 || ||||||||||||| ||| || | ||||| | || || || ||||| ||| | Sbjct 2681 GATGTTGAGGGACTGGGACTGATCAATGAAGGCACCTCGGTCGGCAGCCATC-TGA--AC 2625 Query 243934 GTCCTT---CTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAA 243990 | ||| ||| || ||||| | | |||||||||| || ||||| | |||||| Sbjct 2624 GACCTGGCGCTGCGAAATCTCCCAGACGGTCTTGTAGAGGGCCTTGACCTCGGCGGGGAT 2565 Query 243991 CCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTT 244050 ||||||||| | || || || | | | |||| || | |||| ||| Sbjct 2564 GTTGGGGATGTTCTGGATGGAACCGTTCTCGGCAATGATTCGGTTTTTCATGGCATCCGA 2505 Query 244051 CCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCACCACCTGAAACTCTCC 244110 ||||||||||| | | || ||| || ||| ||| || ||||| ||||| || Sbjct 2504 CCACAGGCCCATGTCAACAAGGTCCTTGAGCAGCCAGGGGTTGACGACCTGGAACTCGCC 2445 Query 244111 CGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCC 244170 | || || ||||||||||||| |||| | || ||||||| || ||| ||||||| Sbjct 2444 AGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTGCC 2385 Query 244171 CAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCC 244230 ||| ||||||| || || ||||| ||||| || | | |||||||||||| | | ||| Sbjct 2384 CAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCAAGCAGCAGACTGTTGCGAATGCC 2325 Query 244231 GTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGCG 244290 |||| || || | ||||| | | ||||||||| | | | || ||| | || | Sbjct 2324 GTGCTCCTTGACCTGCTCCCTGAGGTTCTCCCAGTCCCAGAGGTCAGA-AGG-CTTCACA 2267 Query 244291 TTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGT 244350 || ||||||||| ||||| || | |||| | |||| ||||| | |||| Sbjct 2266 TT-------CCACATGTCGAACTGGAGAATACCCTCAGAGGCGGGAGAGCCCTTGAAGGT 2214 Query 244351 CGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGCTCTCGTCGAGGGCGGCGTAGTAGA 244409 | ||||||||| || || |||||||| || | || |||||| || | ||||| Sbjct 2213 GGAGTAGGGACCCTCCTCCTTGGCCAGCTGCACCGAAGCAGT-GAGGGCAGCATGGTAGA 2155 Query 244410 TGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCCA 244469 |||||||||||||| |||||| | || || |||| | | ||| || |||| || Sbjct 2154 TGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGAGACTCGAAAGGCATGCGCA 2095 Query 244470 TCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGT 244529 | ||| | || || || ||||| || || | || ||||||| ||||||| ||| Sbjct 2094 GAGCAAGGAAAGCATCAGCAAGACCCTGGACACCAACACCAATGGGTCGGTGTCGCATGT 2035 Query 244530 TGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGC 244589 || | ||||| | || ||||| ||| ||||||| | | |||| ||||||| Sbjct 2034 TGCTGTTGCGAGCTTCCGTAACAGGGTAGTGGTTCACGTCGATAATCCTGTTCAGGTTGC 1975 Query 244590 GGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGG 244649 | || | | ||||||| || | ||| ||||| || | | | ||| ||| Sbjct 1974 GAACGACAACCTGTGTGACGTCGTGCAACTTCTGGAAGTCATA---GCAAGCATCATCGT 1918 Query 244650 CGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCT 244709 | || ||| || || | ||||| | || ||||||||||| || |||| Sbjct 1917 AGTTGATGA-----ACGAAGGC----AGGGCCAGAGAAGCAAGGTTGCAGACAGCAACCT 1867 Query 244710 CCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCA 244769 | || | | | ||||| || ||||||||||||||| || || ||||||||||| Sbjct 1866 CATCAGGGGCGCAGTACTCGATAATCTCGGTGCAGAGATTGGAGCTACGGATGGTGCCCA 1807 Query 244770 GGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGG 244829 ||| || || ||| |||| ||||||| ||||||||||||||||||||| |||| Sbjct 1806 GGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCGG 1747 Query 244830 TCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAG 244889 ||||| ||| || |||||| | | |||||| | | ||||| | ||| ||||| Sbjct 1746 TCTCGGTCTGCGCCTCGAGGATGGCATACCAGAGCTTCTGGGCCTTCATGGTCTTGCGAC 1687 Query 244890 CCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGT 244949 |||||||| | ||| || ||| || ||||||||||| ||| || ||| Sbjct 1686 CCTTGCCCGCCTTCTCATACTTTTCGTAAAGAGCCTCGAACTCCTCGCCATAGCAGTCGG 1627 Query 244950 CTAGGCCGGGGCACGACGCCGGG-CACATGAGACTCCACTCGCCGCCGTCCTTGACCCTC 245008 | || ||||||||| || ||| |||||||| |||| || ||| | || ||| | | Sbjct 1626 CCAGACCGGGGCACT-CGTTGGGACACATGAGGGTCCAGTCACCGTTCTTCTCGACACGC 1568 Query 245009 TGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCC 245068 | ||||||||| ||||| |||||||| ||| |||| ||||| | || | ||| ||| Sbjct 1567 TTCATGAAGAGATCGGGAATCCAGAGAGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCC 1508 Query 245069 GAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATG 245128 ||| |||||| | ||| || | || |||||||| || ||||||||||||| | | Sbjct 1507 TTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGG 1448 Query 245129 TAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCG-C 245187 |||| || | ||| || || ||||||||||| |||||||| || || | || | Sbjct 1447 TAGATGGCAAAGGCACCAGGTCGCTTGTTGCCACCCTGGTCGACGTACCGGGC-AGTGTT 1389 Query 245188 GTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTA 245247 |||||||| || || | || | ||||| ||| |||||||| || |||||| Sbjct 1388 GTTGAAGACACGAAGCATGGGGGTGACACCGTTGGAGGTACCGTTGGTACCAGCGATGTA 1329 Query 245248 GGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGAT 245307 | ||| || | | || | || | || ||| | || || || ||||||||| Sbjct 1328 AGAGCCAGTGGCACGGATTCGGTGGACGTTCAGGCCGATACCACCCGCCATCTTGGAGAT 1269 Query 245308 GAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAG 245367 | ||| ||| |||||| || || || ||||| ||||||||| ||||||| || Sbjct 1268 CATGGCACAGGTCTTGAGAGTATCATAAATACCCTCAATGCTGTCCTCTTTCATGTCGAC 1209 Query 245368 CAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGC 245427 ||| ||||| ||||||||||| |||| ||| | | | ||||| || |||||| ||| Sbjct 1208 CAGGAAGCATGAGGACAGCTGAGGCTGGGGAGTACCAGCATTGAAGAGGGTGGGGGAGGC 1149 Query 245428 GTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCTGGAGCAGAGCGTCGATGTTGTC 245487 ||||| ||| | |||||| | | ||| |||| || | | || || | ||| Sbjct 1148 ATGGGTGAAGAATTTGCTCGACATCAGGTTGTAGGTCTCCAGGACACGCTCAATATCGTC 1089 Query 245488 GCCGTGGAT-CTGCAGGGCGCACCTCATGAGGGTGTGCTGGGG-CG-TC-TCGATGGGTC 245543 || ||| | | | | || | ||||| |||||||||| || || | || | Sbjct 1088 ACCCCAGATGCCGACAGACACA-CGCATGATCATGTGCTGGGGACGCTCAACAATCTTGC 1030 Query 245544 CCTCGGGTCCCTTGAGCATGTAGGAGCGCTCGAGCGTCTTGAACCCAAAGTAC 245596 | || |||||| | |||||| ||||| || |||||||| ||||||||| Sbjct 1029 CATC---AATCTTGAGGAGGTAGGATCGCTCAAGAGTCTTGAAGCCAAAGTAC 980 >seq3424 Length=5400 Score = 396 bits (438), Expect = 5e-105 Identities = 614/860 (71%), Gaps = 28/860 (3%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || ||| |||||| |||||||||||||| || Sbjct 3365 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAGATTGATCTA 3424 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCA-----CTGTCTGAGAACGAAAAGTTTTTCCTCA 42414 ||||||| || |||| | || ||| ||| |||| |||| ||| || Sbjct 3425 TCCAAGGATCTCCACGACTGGAA--CAACCGCCTGACTGCCGACGAGCAGTTCTTCGTCT 3482 Query 42415 AAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCA 42474 |||| || ||||||||||| |||||||||||||| ||||| |||||||| | | Sbjct 3483 CCCACATCCTCGCCTTCTTCGCTGCCTCTGACGGCATCGTCAACGAGAACCTTGTCGAGC 3542 Query 42475 GGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCA 42534 | |||| ||||| ||| | ||||| || |||||||||||||||||||| | Sbjct 3543 GATTCAGCGGCGAGGTCCAGATCCCCGAGGCCCGATGCTTCTACGGCTTCCAGATCATGA 3602 Query 42535 TAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATC 42591 | |||||| | ||||| ||| ||| | || |||| |||| |||||| ||| | Sbjct 3603 TGGAGAACATCCACTCCGAGACCTACTC---GCTCCTCATTGACACCTACATCAAGGAGC 3659 Query 42592 CCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGG 42651 | | | || | | || ||||| ||||| ||||| || ||||| ||| ||||||| Sbjct 3660 CAGCTCAACGAACCTACCTCTTCAACGCCATTGAGACCATCCCCTGTATCCGCAAGAAGG 3719 Query 42652 CGGACTGGGCGCTCAACTGGATCGAGAGTCCCG-ACGCAACGTTCGGCGAGAGGCTGGTA 42710 | |||||||| || |||||| || | | | || | | || | || | || || Sbjct 3720 CCGACTGGGCCATCCGATGGATCCAG-GACAAGAACTCGTCCTTTGCTCAGCGTCTCGTC 3778 Query 42711 GCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTC 42770 |||||| | ||||||||||| ||||||||| || ||||| |||||||||||||||||| Sbjct 3779 GCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCTC 3838 Query 42771 AAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGA 42829 ||| || || || ||||| || || ||||| || ||||| |||||| | ||||| Sbjct 3839 AAGAAGCGTGGCCTC-ATGCCTGGCCTGACCTTTTCCAACGAGCTCATCTCTCGTGACGA 3897 Query 42830 GGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTC-AGGCACAAGCCCT 42888 ||| || || | |||||||| |||||||| ||| ||||||| ||| | ||| Sbjct 3898 GGGTCTTCACACCGACTTTGCATGCCTCCTCCACTC---CCACCTCAAGGGCCGTGCCAG 3954 Query 42889 CGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCA 42948 | ||| || ||| || ||||||||| || ||||| || ||| |||||||||| | Sbjct 3955 C-AAGCAGGTCATCCAGGACATCATCACCGATGCCGTCACCATTGAGCAGGAGTTCCTGA 4013 Query 42949 CGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCC 43008 | || | || ||| ||||| ||||||||||| |||||||||| |||||||| Sbjct 4014 CCGAGGCCCTCCCCTGCGCCCTGCTCGGCATGAACGCCGACCTCATGAAGCAGTACATCG 4073 Query 43009 AGTACGTCGCCGACCATCTCCT-GT-GCCAGATGGGTCTC-AGCCGCCTCTACAACACGC 43065 ||| ||||||||||| ||||| || ||| | || | || | ||||||| | Sbjct 4074 AGTTCGTCGCCGACCGCCTCCTCGTCGCC--CTCGGCAACGAGAAG-GTCTACAAGGCCA 4130 Query 43066 CGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGA 43125 | |||||||||||| |||||||||||||| | | |||||||||||||| ||||||| Sbjct 4131 CCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGA 4190 Query 43126 AGCGCGTCGCCGACTACCAG 43145 |||| |||| ||||||||| Sbjct 4191 AGCGTGTCGGTGACTACCAG 4210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944091523436320