Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680525.1_202016-07-06]
20,982 sequences; 49,446,642 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq6553 493 2e-134
seq3424 396 5e-105
>seq6553
Length=2786
Score = 493 bits (546), Expect = 2e-134
Identities = 1162/1733 (67%), Gaps = 41/1733 (2%)
Strand=Plus/Minus
Query 243874 GAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGAG 243933
|| ||||||||||||| ||| || | ||||| | || || || ||||| ||| |
Sbjct 2681 GATGTTGAGGGACTGGGACTGATCAATGAAGGCACCTCGGTCGGCAGCCATC-TGA--AC 2625
Query 243934 GTCCTT---CTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAA 243990
| ||| ||| || ||||| | | |||||||||| || ||||| | ||||||
Sbjct 2624 GACCTGGCGCTGCGAAATCTCCCAGACGGTCTTGTAGAGGGCCTTGACCTCGGCGGGGAT 2565
Query 243991 CCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTT 244050
||||||||| | || || || | | | |||| || | |||| |||
Sbjct 2564 GTTGGGGATGTTCTGGATGGAACCGTTCTCGGCAATGATTCGGTTTTTCATGGCATCCGA 2505
Query 244051 CCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCACCACCTGAAACTCTCC 244110
||||||||||| | | || ||| || ||| ||| || ||||| ||||| ||
Sbjct 2504 CCACAGGCCCATGTCAACAAGGTCCTTGAGCAGCCAGGGGTTGACGACCTGGAACTCGCC 2445
Query 244111 CGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCC 244170
| || || ||||||||||||| |||| | || ||||||| || ||| |||||||
Sbjct 2444 AGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTGCC 2385
Query 244171 CAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCC 244230
||| ||||||| || || ||||| ||||| || | | |||||||||||| | | |||
Sbjct 2384 CAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCAAGCAGCAGACTGTTGCGAATGCC 2325
Query 244231 GTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGCG 244290
|||| || || | ||||| | | ||||||||| | | | || ||| | || |
Sbjct 2324 GTGCTCCTTGACCTGCTCCCTGAGGTTCTCCCAGTCCCAGAGGTCAGA-AGG-CTTCACA 2267
Query 244291 TTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGT 244350
|| ||||||||| ||||| || | |||| | |||| ||||| | ||||
Sbjct 2266 TT-------CCACATGTCGAACTGGAGAATACCCTCAGAGGCGGGAGAGCCCTTGAAGGT 2214
Query 244351 CGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGCTCTCGTCGAGGGCGGCGTAGTAGA 244409
| ||||||||| || || |||||||| || | || |||||| || | |||||
Sbjct 2213 GGAGTAGGGACCCTCCTCCTTGGCCAGCTGCACCGAAGCAGT-GAGGGCAGCATGGTAGA 2155
Query 244410 TGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCCA 244469
|||||||||||||| |||||| | || || |||| | | ||| || |||| ||
Sbjct 2154 TGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGAGACTCGAAAGGCATGCGCA 2095
Query 244470 TCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGT 244529
| ||| | || || || ||||| || || | || ||||||| ||||||| |||
Sbjct 2094 GAGCAAGGAAAGCATCAGCAAGACCCTGGACACCAACACCAATGGGTCGGTGTCGCATGT 2035
Query 244530 TGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGC 244589
|| | ||||| | || ||||| ||| ||||||| | | |||| |||||||
Sbjct 2034 TGCTGTTGCGAGCTTCCGTAACAGGGTAGTGGTTCACGTCGATAATCCTGTTCAGGTTGC 1975
Query 244590 GGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGG 244649
| || | | ||||||| || | ||| ||||| || | | | ||| |||
Sbjct 1974 GAACGACAACCTGTGTGACGTCGTGCAACTTCTGGAAGTCATA---GCAAGCATCATCGT 1918
Query 244650 CGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCT 244709
| || ||| || || | ||||| | || ||||||||||| || ||||
Sbjct 1917 AGTTGATGA-----ACGAAGGC----AGGGCCAGAGAAGCAAGGTTGCAGACAGCAACCT 1867
Query 244710 CCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCA 244769
| || | | | ||||| || ||||||||||||||| || || |||||||||||
Sbjct 1866 CATCAGGGGCGCAGTACTCGATAATCTCGGTGCAGAGATTGGAGCTACGGATGGTGCCCA 1807
Query 244770 GGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGG 244829
||| || || ||| |||| ||||||| ||||||||||||||||||||| ||||
Sbjct 1806 GGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCGG 1747
Query 244830 TCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAG 244889
||||| ||| || |||||| | | |||||| | | ||||| | ||| |||||
Sbjct 1746 TCTCGGTCTGCGCCTCGAGGATGGCATACCAGAGCTTCTGGGCCTTCATGGTCTTGCGAC 1687
Query 244890 CCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGT 244949
|||||||| | ||| || ||| || ||||||||||| ||| || |||
Sbjct 1686 CCTTGCCCGCCTTCTCATACTTTTCGTAAAGAGCCTCGAACTCCTCGCCATAGCAGTCGG 1627
Query 244950 CTAGGCCGGGGCACGACGCCGGG-CACATGAGACTCCACTCGCCGCCGTCCTTGACCCTC 245008
| || ||||||||| || ||| |||||||| |||| || ||| | || ||| | |
Sbjct 1626 CCAGACCGGGGCACT-CGTTGGGACACATGAGGGTCCAGTCACCGTTCTTCTCGACACGC 1568
Query 245009 TGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCC 245068
| ||||||||| ||||| |||||||| ||| |||| ||||| | || | ||| |||
Sbjct 1567 TTCATGAAGAGATCGGGAATCCAGAGAGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCC 1508
Query 245069 GAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATG 245128
||| |||||| | ||| || | || |||||||| || ||||||||||||| | |
Sbjct 1507 TTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGG 1448
Query 245129 TAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCG-C 245187
|||| || | ||| || || ||||||||||| |||||||| || || | || |
Sbjct 1447 TAGATGGCAAAGGCACCAGGTCGCTTGTTGCCACCCTGGTCGACGTACCGGGC-AGTGTT 1389
Query 245188 GTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTA 245247
|||||||| || || | || | ||||| ||| |||||||| || ||||||
Sbjct 1388 GTTGAAGACACGAAGCATGGGGGTGACACCGTTGGAGGTACCGTTGGTACCAGCGATGTA 1329
Query 245248 GGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGAT 245307
| ||| || | | || | || | || ||| | || || || |||||||||
Sbjct 1328 AGAGCCAGTGGCACGGATTCGGTGGACGTTCAGGCCGATACCACCCGCCATCTTGGAGAT 1269
Query 245308 GAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAG 245367
| ||| ||| |||||| || || || ||||| ||||||||| ||||||| ||
Sbjct 1268 CATGGCACAGGTCTTGAGAGTATCATAAATACCCTCAATGCTGTCCTCTTTCATGTCGAC 1209
Query 245368 CAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGC 245427
||| ||||| ||||||||||| |||| ||| | | | ||||| || |||||| |||
Sbjct 1208 CAGGAAGCATGAGGACAGCTGAGGCTGGGGAGTACCAGCATTGAAGAGGGTGGGGGAGGC 1149
Query 245428 GTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCTGGAGCAGAGCGTCGATGTTGTC 245487
||||| ||| | |||||| | | ||| |||| || | | || || | |||
Sbjct 1148 ATGGGTGAAGAATTTGCTCGACATCAGGTTGTAGGTCTCCAGGACACGCTCAATATCGTC 1089
Query 245488 GCCGTGGAT-CTGCAGGGCGCACCTCATGAGGGTGTGCTGGGG-CG-TC-TCGATGGGTC 245543
|| ||| | | | | || | ||||| |||||||||| || || | || |
Sbjct 1088 ACCCCAGATGCCGACAGACACA-CGCATGATCATGTGCTGGGGACGCTCAACAATCTTGC 1030
Query 245544 CCTCGGGTCCCTTGAGCATGTAGGAGCGCTCGAGCGTCTTGAACCCAAAGTAC 245596
| || |||||| | |||||| ||||| || |||||||| |||||||||
Sbjct 1029 CATC---AATCTTGAGGAGGTAGGATCGCTCAAGAGTCTTGAAGCCAAAGTAC 980
>seq3424
Length=5400
Score = 396 bits (438), Expect = 5e-105
Identities = 614/860 (71%), Gaps = 28/860 (3%)
Strand=Plus/Plus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|||||| |||||||||||||| || ||| |||||| |||||||||||||| ||
Sbjct 3365 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAGATTGATCTA 3424
Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCA-----CTGTCTGAGAACGAAAAGTTTTTCCTCA 42414
||||||| || |||| | || ||| ||| |||| |||| ||| ||
Sbjct 3425 TCCAAGGATCTCCACGACTGGAA--CAACCGCCTGACTGCCGACGAGCAGTTCTTCGTCT 3482
Query 42415 AAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCA 42474
|||| || ||||||||||| |||||||||||||| ||||| |||||||| | |
Sbjct 3483 CCCACATCCTCGCCTTCTTCGCTGCCTCTGACGGCATCGTCAACGAGAACCTTGTCGAGC 3542
Query 42475 GGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCA 42534
| |||| ||||| ||| | ||||| || |||||||||||||||||||| |
Sbjct 3543 GATTCAGCGGCGAGGTCCAGATCCCCGAGGCCCGATGCTTCTACGGCTTCCAGATCATGA 3602
Query 42535 TAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATC 42591
| |||||| | ||||| ||| ||| | || |||| |||| |||||| ||| |
Sbjct 3603 TGGAGAACATCCACTCCGAGACCTACTC---GCTCCTCATTGACACCTACATCAAGGAGC 3659
Query 42592 CCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGG 42651
| | | || | | || ||||| ||||| ||||| || ||||| ||| |||||||
Sbjct 3660 CAGCTCAACGAACCTACCTCTTCAACGCCATTGAGACCATCCCCTGTATCCGCAAGAAGG 3719
Query 42652 CGGACTGGGCGCTCAACTGGATCGAGAGTCCCG-ACGCAACGTTCGGCGAGAGGCTGGTA 42710
| |||||||| || |||||| || | | | || | | || | || | || ||
Sbjct 3720 CCGACTGGGCCATCCGATGGATCCAG-GACAAGAACTCGTCCTTTGCTCAGCGTCTCGTC 3778
Query 42711 GCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTC 42770
|||||| | ||||||||||| ||||||||| || ||||| ||||||||||||||||||
Sbjct 3779 GCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCTC 3838
Query 42771 AAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGA 42829
||| || || || ||||| || || ||||| || ||||| |||||| | |||||
Sbjct 3839 AAGAAGCGTGGCCTC-ATGCCTGGCCTGACCTTTTCCAACGAGCTCATCTCTCGTGACGA 3897
Query 42830 GGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTC-AGGCACAAGCCCT 42888
||| || || | |||||||| |||||||| ||| ||||||| ||| | |||
Sbjct 3898 GGGTCTTCACACCGACTTTGCATGCCTCCTCCACTC---CCACCTCAAGGGCCGTGCCAG 3954
Query 42889 CGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCA 42948
| ||| || ||| || ||||||||| || ||||| || ||| |||||||||| |
Sbjct 3955 C-AAGCAGGTCATCCAGGACATCATCACCGATGCCGTCACCATTGAGCAGGAGTTCCTGA 4013
Query 42949 CGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCC 43008
| || | || ||| ||||| ||||||||||| |||||||||| ||||||||
Sbjct 4014 CCGAGGCCCTCCCCTGCGCCCTGCTCGGCATGAACGCCGACCTCATGAAGCAGTACATCG 4073
Query 43009 AGTACGTCGCCGACCATCTCCT-GT-GCCAGATGGGTCTC-AGCCGCCTCTACAACACGC 43065
||| ||||||||||| ||||| || ||| | || | || | ||||||| |
Sbjct 4074 AGTTCGTCGCCGACCGCCTCCTCGTCGCC--CTCGGCAACGAGAAG-GTCTACAAGGCCA 4130
Query 43066 CGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGA 43125
| |||||||||||| |||||||||||||| | | |||||||||||||| |||||||
Sbjct 4131 CCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGA 4190
Query 43126 AGCGCGTCGCCGACTACCAG 43145
|||| |||| |||||||||
Sbjct 4191 AGCGTGTCGGTGACTACCAG 4210
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944091523436320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |