Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680525.1_202016-07-06]
20,982 sequences; 49,446,642 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq3424 122 2e-22
seq699 84.2 5e-11
>seq3424
Length=5400
Score = 122 bits (134), Expect = 2e-22
Identities = 129/170 (76%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 243568 GGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATC 243627
||||||||| | || |||||| ||||||||||| ||||| ||||||||| | || ||
Sbjct 4040 GGCATGAACGCCGACCTCATGAAGCAGTACATCGAGTTCGTCGCCGACCGCCTCCTCGTC 4099
Query 243628 GCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATT 243687
|| || || | ||||| || ||||| ||| |||||||| | ||| |||||| |||
Sbjct 4100 GCCCTCGGCAACGAGAAGGTCTACAAGGCCACCAACCCCTTCGACTTCATGGAGAACATC 4159
Query 243688 TCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA 243737
|| || || || || ||||||||||| ||||||||| |||| || ||
Sbjct 4160 TCCCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCA 4209
>seq699
Length=13526
Score = 84.2 bits (92), Expect = 5e-11
Identities = 123/174 (71%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 334181 GGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCC 334240
|||||| || |||| ||| |||| || || ||||| ||||| || || || | ||
Sbjct 4220 GGGGAAACCCTCAACCTGCTCGTTGTTGATGGCACGCATGAGAGTGGACTTGCCGGAACC 4279
Query 334241 GTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAG 334300
||| || || || ||||||||||| | |||||||| || || | || | ||| ||
Sbjct 4280 GTTGGGACCGCAAAGACCGTAGCGCTGGCCACGCTTGAGGCGGAGGTGAGTCTGGTTGAG 4339
Query 334301 AAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354
||||| || |||| || || ||||| || ||| | || |||||||||||
Sbjct 4340 CAGAATCTTGGCACCGTAGGCAAGAGAGAAAGTACAGTTGCAAAGATCCTCACC 4393
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102583510701700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |