Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680525.1_202016-07-06] 20,982 sequences; 49,446,642 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq20342 145 2e-29 seq2352 129 1e-24 seq1107 116 9e-21 seq7999 95.1 3e-14 >seq20342 Length=208 Score = 145 bits (160), Expect = 2e-29 Identities = 146/190 (77%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 199437 ACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGA 199496 ||||||| |||| ||||||||| |||| || | || || ||||||||||| ||||||| Sbjct 1 ACTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGA 60 Query 199497 AGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGG 199556 |||| |||||||||||||||||| || || || ||||||||||| |||||| Sbjct 61 AGATCAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTCACAT 120 Query 199557 ATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCA 199616 |||| |||||| | | || || || | ||||| |||||||||||||| || |||| Sbjct 121 TCTCGATGGTGTCCGAAGACTCCACCTCGAGGGTGATGGTCTTACCCGTGAGGGTCTTCA 180 Query 199617 CAAAAATTTG 199626 | || ||||| Sbjct 181 CGAAGATTTG 190 >seq2352 Length=6378 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||| || || ||||||||||| |||| ||||||||| | || || | || ||| Sbjct 1153 AGAACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCGTCT 1212 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| || || ||||| || ||||||||||| || || || || ||| Sbjct 1213 TCCAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 1272 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||||||| || | ||| || | | || || |||| ||||| ||| Sbjct 1273 TGAATCTTGGACTTCACGTTGTCAATGGTATCGCTCGACTCGACCTCCAGAGTGATGGTC 1332 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || |||||||| || ||||| || || Sbjct 1333 TTTCCAGTGAGAGTCTTGACAAAGATCTG 1361 Score = 118 bits (130), Expect = 2e-21 Identities = 146/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||||||||| |||||||| || | |||||||| || | || | ||||| Sbjct 1609 AGGACGAGGTGGAGAGTTGACTCCTTCTGAATATTGTAGTCGGCGAGGGTTCGGCCATCC 1668 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| |||||||| || || ||||||||||| ||| ||| || || || Sbjct 1669 TCAAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTATCT 1728 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| ||||| | | || || || | ||||| ||| Sbjct 1729 TGGATCTTCGACTTGACGTTGTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATAGTC 1788 Query 199598 TTACCCGTGAGAGTTTTCAC 199617 ||||| ||||| || || || Sbjct 1789 TTACCAGTGAGGGTCTTGAC 1808 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| |||||||||||||| |||| ||||||||| | ||| | || || Sbjct 1381 AGAACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTTCGGCCGTCC 1440 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||| |||||||| ||||| || || ||| ||| ||||| ||| Sbjct 1441 TCGAGCTGCTTGCCGGCAAAGATGAGTCGCTGTTGATCAGGAGGAATGCCTTCCTTGTCC 1500 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||| || | |||||| | | ||| || || | ||||| ||| Sbjct 1501 TGGATCTTCGATTTCACATTGTCAATGGTGTCGGACGATTCCACCTCAAGGGTGATAGTC 1560 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || || || || || Sbjct 1561 TTTCCGGTGAGGGTCTTGACGAAGATCTG 1589 Score = 107 bits (118), Expect = 5e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| |||||||| ||||||||||| |||| |||||| || | | ||| Sbjct 1875 CGAAGGCGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCGGAGAGAGTG 1934 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || |||||||| |||||||| || || ||||||||||| || || || Sbjct 1935 CGGCCATCCTCAAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGGGGGATGCCC 1994 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| ||| || |||| ||| || | | || || || | Sbjct 1995 TCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTATCCGAGGACTCGACCTCGAGG 2054 Query 199589 GTGATCGTCTTACCCGT 199605 || || ||||| ||||| Sbjct 2055 GTAATGGTCTTGCCCGT 2071 >seq1107 Length=10776 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| |||||||| || |||||| |||| ||||||||| || || | ||||| Sbjct 5562 AGGACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 5503 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || || |||||||| ||||||||||| || || || || ||| Sbjct 5502 TCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCC 5443 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||| | | || || || | ||||| ||| Sbjct 5442 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATTGTC 5383 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || || ||||| || || Sbjct 5382 TTCCCCGTGAGGGTCTTGACAAAGATCTG 5354 >seq7999 Length=1671 Score = 95.1 bits (104), Expect = 3e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 |||| |||| ||||||||| | | || | ||||| ||||||||||| || ||||||| Sbjct 349 CCTTCTGGATGTTGTAGTCGGAAAGGGTTCGGCCATCCTCCAGCTGCTTGCCAGCGAAGA 290 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559 | || |||||||||||||| || || || ||||| ||||| ||| || | Sbjct 289 TCAGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 230 Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619 | | |||||| | | || || || | ||||| ||||| ||||| || || ||||| | Sbjct 229 CAATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 170 Query 199620 AA 199621 || Sbjct 169 AA 168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178604668295794