Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680525.1_202016-07-06]
20,982 sequences; 49,446,642 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq4679 279 7e-70
>seq4679
Length=3385
Score = 279 bits (308), Expect = 7e-70
Identities = 474/682 (70%), Gaps = 14/682 (2%)
Strand=Plus/Minus
Query 7408 CTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTC 7467
||| || || ||||| ||||| | | ||||| || ||| | ||||| || ||
Sbjct 1157 CTTGTGCTTGCGTTTGAACTCATTAACAAAGTGGTTAACGAGACGGTTGTCGAAGTCCTC 1098
Query 7468 ACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTT 7527
|||||||| ||| || || || ||||| | ||||| || |||||||| | |||||| |
Sbjct 1097 ACCACCCAGGTGAGTGTCACCGGCGGTAGACTTGACCTCGAAGATACCCTCCTCAATGGT 1038
Query 7528 TAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTC 7587
| | ||||||||| || ||||||||||| || || || ||||| ||||| ||| |
Sbjct 1037 CAGGAGCGAAACATCGAAAGTACCACCACCAAGATCGAAGATGAGAACGTTGCGCTCGCC 978
Query 7588 GTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACG 7647
|| | ||||| ||||||||||| || || || || || || || || || || || ||
Sbjct 977 CTCAATCTTCTTGTCGAGACCGTAGGCAATGGCGGCAGCGGTGGGCTCGTTGATGATTCG 918
Query 7648 AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTT 7707
||| ||| ||||||||||| | ||||| || || || || || || || |||||
Sbjct 917 GAGAACGTTGAGGCCAGCAATGAGACCGGCATCCTTGGTGGCCTGGCGCTGGGAGTCGTT 858
Query 7708 AAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGC 7767
|||||||| ||||| || ||||| |||| |||| ||| || || || || || ||
Sbjct 857 GAAGTAGGCGGGGACAGTGACGACAGCGTTGTTGACGGTCTCGCCAAGGTAGGACTCGGC 798
Query 7768 GATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGT 7827
| | ||| ||| ||||| || ||||| || || ||||| || | | || || | ||
Sbjct 797 GGTCTCTCGCATCTTGGTGAGGACCATGGAGGAGATCTCCTCGGGGGTGAA-GGTCTTGT 739
Query 7828 T-TCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACC---GGGGATAACCT 7883
| || || || || ||||| || || ||||| || || |||| | ||| | ||
Sbjct 738 TCTCGCCCTTGAACTCAACCTCGATGATGGGCTT----GC--CACCCTTGTCGATGATCT 685
Query 7884 TATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAA 7943
| | | | | ||||| ||| | || |||| |||| | ||||| | ||||| |
Sbjct 684 TGAAGGGGAAGTGCTTCATGTCGGCCTGAACCTCAGGGTCGGCGAACTTGCGACCGATCA 625
Query 7944 GACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGT 8003
| ||||| || || || || ||||| | |||||||||||| |||||||| || || |
Sbjct 624 GGCGCTTGGCGTCGAAGACGGTGTTCTGGGGGTTCATGGCGACCTGGTTCTTGGCGGCAT 565
Query 8004 CCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCC 8063
| ||||| ||||| || | || || || ||||| | || || || ||||| || |
Sbjct 564 CACCGATCAGACGCTC---GGTGTCGGTGAAACCGACGAAAGAGGGAGTGGTTCGGTTAC 508
Query 8064 CTTGGTCGTTCGCAATAATTTC 8085
| |||||||| || || || ||
Sbjct 507 CCTGGTCGTTGGCGATGATGTC 486
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 634966220544880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |