Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680525.1_202016-07-06]
20,982 sequences; 49,446,642 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq6553 206 3e-48
>seq6553
Length=2786
Score = 206 bits (228), Expect = 3e-48
Identities = 922/1437 (64%), Gaps = 39/1437 (3%)
Strand=Plus/Minus
Query 105895 GTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGG 105954
|||||| | | ||||| || |||||| | | | | |||||||| | ||||| ||
Sbjct 2465 GTTGACGACCTGGAACTCGCCAGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAGG 2406
Query 105955 TTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCAT 106014
|| ||||| || || || |||| ||| || | || ||| || ||||| || || |
Sbjct 2405 CTCGAAGCACTCGTTGTTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCAAG 2346
Query 106015 CAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTA 106074
|| |||||||| |||| || | ||||||| | ||| |||| |||||||| |
Sbjct 2345 CAGCAGACTGTTGCGAATGCCGTGCTCCTTGACCTGCTCCCTGAGGTTCTCCCAGTCCCA 2286
Query 106075 GTTG--AGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGA 106132
| | || || ||||| |||| |||| || || || || | || | || | ||||
Sbjct 2285 GAGGTCAGAA-GGCTTCACATTCC-ACATGTCGAACTGGAGAATACCCTCAGAGGCGGGA 2228
Query 106133 GAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATT-CACAGCTCGCCTCCAG 106191
|| |||| || || |||| ||| | | | |||| | ||| | || ||
Sbjct 2227 GAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCCAGCTGCACCGAA-GCAGTGAG 2169
Query 106192 GGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATC 106251
|| || || || ||||| || ||||| | || | ||| || || || ||
Sbjct 2168 GGCAGCATGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGAGACTC 2109
Query 106252 -AAATGCGTAGCGGCACAA-AATAAATACATCCGCGAGACCTTGAACACCCAAACCAATA 106309
||| || | ||| || | || || |||| || ||||| || ||||| | ||||||
Sbjct 2108 GAAAGGCAT-GCG-CAGAGCAAGGAAAGCATCAGCAAGACCCTGGACACCAACACCAATG 2051
Query 106310 GGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATG 106369
|||| ||||||||| || || || || | ||| || || || ||| ||
Sbjct 2050 GGTCGGTGTCGCATGTTGCTGTTGCGAGCTTCCGTAACAGGGTAGTGGTTCACGTCGATA 1991
Query 106370 ACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAA 106429
| | ||| || || |||| || ||||| || || | || | | ||| |
Sbjct 1990 ATCCTGTTCAGGTTGCGAACGACAACCTGTGTGACGTCGTGCAACTTCTGGAAGTCATA- 1932
Query 106430 GTGCGAGTCTCTTCAT---TGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACA 106486
|| || || || | ||| || || ||||| | || || | ||||| |||
Sbjct 1931 --GCAAGCATCATCGTAGTTGATGAACGAAGGCAGGGCCAGAGAAGCAAGGTTGCAGACA 1874
Query 106487 GCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATC 106546
|| |||||| | |||||| | ||| || || || | ||||| || ||
Sbjct 1873 GCAACCTCATCAGGGGCGCAGTACTCGATAATCTCGGTGCAGAGATTGGAGCTACGGATG 1814
Query 106547 GTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGC 106606
|| |||| ||||| ||||| ||||| |||||| ||||||||||||||| ||||
Sbjct 1813 GTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGG 1754
Query 106607 GTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAAT 106665
| || ||||| ||||| | || ||| || || | ||| | | || | | || ||
Sbjct 1753 TTGCCGGTCTCGGTCTGCGCCTCGAGGATGGCATACCAGAGCTTCTGGGCCT----TCAT 1698
Query 106666 GGCGTTG-GCCCGT--CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACC 106722
|| ||| | || | ||| || ||| |||||| ||| || || || |||||||| |
Sbjct 1697 GGTCTTGCGACCCTTGCCCGCCTTCTCATACTTTTCGTAAAGAGCCTCGAACTCCTC-GC 1639
Query 106723 CACCGC-GTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCT 106781
|| || ||||| ||||| || || || ||||| | || | ||| | ||| ||
Sbjct 1638 CATAGCAGTCGGCCAGACCGGGGCACTCGTTGGGACACATGAGGGTCCAGTCACCGTTCT 1579
Query 106782 CCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACC 106841
||| || ||||||||||| || || |||||||| || | || || || | |
Sbjct 1578 TCTCGACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCCAGGAACAGGTCGCGGGCGC 1519
Query 106842 GAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCC 106901
| |||| || | || ||||| || | ||||||||||| | || ||| |||||||
Sbjct 1518 GGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCC 1459
Query 106902 ATGGCTCAAGATAGACTGCGA------TAGATCCCTTTCGACGCCCAGCTTGATTTACAT 106955
| |||||||| |||| || | || || ||| | | ||| | || | || |
Sbjct 1458 AGGGCTCAAGGTAGATGGCAAAGGCACCAGGTCGCTT--GTTG-CCACCCTGGTCGACGT 1402
Query 106956 AGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTG 107015
| || || ||| ||| || || |||||||| || | | ||| | || ||| || |
Sbjct 1401 ACCGGGCAGTGTTGTTGAAGACACGAAGCATGGGGGTGACACCGTTGGAGGTACCGTTGG 1342
Query 107016 TCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAG 107075
| || || ||| | |||| | | |||| || || || ||||| || |
Sbjct 1341 TACCAGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGACGTTCAGGCCGATACCACCCG 1282
Query 107076 CCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCT 107135
|| ||| ||||| ||||| | | ||||| |||| ||||| | || |||||
Sbjct 1281 CCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATACCCTCAATGCTGTCCT 1222
Query 107136 CCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGA 107195
| || || ||| |||||||| ||||| ||| || || ||||||||||||||||
Sbjct 1221 CTTTCATGTCGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGAGTACCAGCATTGAAGA 1162
Query 107196 GGGTTGGTGTTGCGTGAATGAACA--TACCTTGGGACATCTTGTCGTATGTCTCCAAGAC 107253
|||| || | || || |||| | | || |||||| || ||| ||||||| |||
Sbjct 1161 GGGTGGGGGAGGCATGGGTGAAGAATTTGCT--CGACATCAGGTTGTAGGTCTCCAGGAC 1104
Query 107254 AGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGGG 107310
| ||||| || || || |||||||| | ||||||||| | ||||| |||||
Sbjct 1103 ACGCTCAATATCGTCACCCCAGATGCCGACAGACACACGCATGATCATGTGCTGGGG 1047
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589826062785680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |