Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680525.1_202016-07-06]
20,982 sequences; 49,446,642 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq6553 448 9e-121
seq3424 206 5e-48
>seq6553
Length=2786
Score = 448 bits (496), Expect = 9e-121
Identities = 1238/1864 (66%), Gaps = 94/1864 (5%)
Strand=Plus/Minus
Query 212574 GCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTTAGGCC---CTTGCCCCAGCCG 212630
|| ||||||| || || || ||||||||||| ||||| ||||| ||| |||||||
Sbjct 2785 GCGGCAGCCTGCGTTCGCAGGTAGTACATGCCCGTCTTCAGGCCGAGCTT---CCAGCCG 2729
Query 212631 TGCATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATATTCTGGTCATCCTCGTGGCCCAG 212689
| |||||| |||| ||| |||| | || | |||| | | ||||
Sbjct 2728 GCAAAGTGCAT-GCTGGTGA---TCTTGCCC---ATGGTGGGGTCCTTCATGTGG----- 2681
Query 212690 ATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTAT 212749
| ||| |||||||| ||| || ||||| | | | ||| || ||||| | |
Sbjct 2680 ----ATGTTGAGGGACTGGGACTGATCAATGAAGGCACCTCGGTCGGCAGCCATCTGAAC 2625
Query 212750 GATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAA 212809
|| | | ||| || | |||||| ||||||||| ||| | |||| || | ||||
Sbjct 2624 GACCTGGCGCTGCGAAATCTCCCAGACGGTCTTGTAGAGGGCCTTGACCTCGGCGGGGAT 2565
Query 212810 GCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCA--GCTGCAGGCG--CATGTCCT 212865
| |||||||||||| | || || || | | | || | | | | |||| | |
Sbjct 2564 GTTGGGGATGTTCTGGATGGAACC---GT-TCTCGGCAATGATTCGGTTTTTCATGGCAT 2509
Query 212866 CGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGT 212925
| ||| |||||| || | ||| ||||| ||| |||||||| | |||||| |
Sbjct 2508 CCGACCACAGGCCCATGTCAACAAGGTCCTTGAGCAGCCAGGGGTTGACGACCTGGAACT 2449
Query 212926 CACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGT 212985
| || | ||| || | | |||||| | ||| || ||||| ||||||| || ||||||||
Sbjct 2448 CGCCAGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGT 2389
Query 212986 TCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCA 213045
| ||||| ||||| | ||| ||||| || ||||| || || | ||| |||||||| | |
Sbjct 2388 TGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCAAGCAGCAGACTGTTGCGAA 2329
Query 213046 CTCCGTGCTCGCCGATGAGGCGCC-GAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCC 213104
|||||||| || | || || | ||| |||||||||| | |||| |||
Sbjct 2328 TGCCGTGCTCCTTGACCTGCTCCCTGAGGTTCT-CCCAGTCCCAGAGGTCAGA-AGG--- 2274
Query 213105 TCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCA----CGGGGCTGCC 213160
|||||| ||||||||||| ||||| | || || |||| |||| |||
Sbjct 2273 -----CTTCACATTCCACATGTCGAACTGGAGAATACC----CTCAGAGGCGGGAGAGCC 2223
Query 213161 CTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCA-GGACGCCTGCAGGGCAG 213219
|| | | | ||||||||| || | |||||||||||||| ||| || || |||||||
Sbjct 2222 CTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCCAGCT-GCACCGAAGCAGTGAGGGCAG 2164
Query 213220 CGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGG 213279
| | ||||||||| || || |||| | ||||||||| ||||| || ||| ||| |
Sbjct 2163 CATGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGAGACTCGAAAG 2104
Query 213280 GCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGT 213339
|||| || |||| ||||||| || |||||||| || | || ||||||| ||
Sbjct 2103 GCATGCGCAGAGCAAGGAAAGCATCAGCAAGACCCTGGACACCAACACCAATGGGTCGGT 2044
Query 213340 GTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTG 213398
||| || ||| ||| |||| ||| | ||||| ||| |||||| ||| ||
Sbjct 2043 GTCGCATGTTGCTGTTGCGAGC-TTCCGTAACAGGGTAGTGGTTCACGTCGATAATCCTG 1985
Query 213399 TTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAG 213458
|| |||||||| | | || | ||||| | | || ||| || ||| | |||
Sbjct 1984 TTCAGGTTGCGAACGACAACCTGTGTGACGTCGTGCA---ACTTCTG---GAAGTCATAG 1931
Query 213459 C------CCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCC 213512
| | ||| | | ||| ||||||||| | || |||||||| || ||
Sbjct 1930 CAAGCATCATCGTAGTTGATGAACGAAGGCAGGGCCAGAGAAGCAAGGTTGCAGACAGCA 1871
Query 213513 ACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTG 213572
||||| | || | | |||||| || ||||||||||| || ||| || |||||||||
Sbjct 1870 ACCTCATCAGGGGCGCAGTACTCGATAATCTCGGTGCAGAGATTGGAGCTACGGATGGTG 1811
Query 213573 CCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAG-AATCCTTGTAGAGCATGTAGGGGGA 213631
|||||||||| ||| ||| ||||| | |||| ||||||||||||||| |||||
Sbjct 1810 CCCAGGTTCTTCTGG-TTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTT 1752
Query 213632 CCCGGTCTCTAGCTGGGACACCAGTATCTGGC--TCCAGAGGTACCTGGCCTTGACCACC 213689
|||||||| ||| | | | || | |||| |||||| | | |||||| ||
Sbjct 1751 GCCGGTCTCGGTCTGCGCCTCGAGGA--TGGCATACCAGAGCTTCTGGGCCTT---CATG 1697
Query 213690 CGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCC 213749
| || | | | || ||| |||| |||||| || | | ||| || | |||
Sbjct 1696 GTCTTGCGACCCTTGCCCGCCTTCTCATACTTTTCGTAAAGAGCCTCGAACTCCTCGCCA 1637
Query 213750 CAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCG-TCATC 213808
|| | |||| || || || ||||||||||||| ||||||| ||| || ||
Sbjct 1636 TAGCAGTCGGCCAGACCGGGGCACTCGTTGGGACACATGAGGGTCCAGTCACCGTTCTTC 1577
Query 213809 TCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCT 213868
|| ||| | || |||||| || || || | ||| || || ||||||||| | || |
Sbjct 1576 TC-GACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCCAGGAACAGGTCGCGGGCGCG 1518
Query 213869 CCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCA 213928
||| ||| || ||| |||||||| || || || ||||||| || ||||||||
Sbjct 1517 GACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCA 1458
Query 213929 CGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCACCAGCCT 213985
||||| | ||||||||||||||| || | || | ||||| |||||||| || ||
Sbjct 1457 GGGCTCAAGGTAGATGGCAAAGGCACCAGGTCGCTTGTTGCCACCCTGGTCGACGTACCG 1398
Query 213986 GGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCC 214045
||| ||||||||| || || | ||| | |||||||| |||||||| ||
Sbjct 1397 GGCAGTGTTGTTGAAGACACGAAGCATGGGGGTGACACCGTTGGAGGTACCGTTGGTACC 1338
Query 214046 CGCTATATACGAGCCGGAGGCCC---TCAGGTTGCTCATGGAGAGCCCTATGCCACCGGC 214102
|| || || ||||| | ||| | | ||| | | | || || || ||||| ||
Sbjct 1337 AGCGATGTAAGAGCCAGTGGCACGGATTCGGTGG---ACGTTCAGGCCGATACCACCCGC 1281
Query 214103 GTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATC 214162
||||||||||||||| ||| | | | ||| || || || | |||||||| ||
Sbjct 1280 CATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATACCCTCAATGCTGTCCTC 1221
Query 214163 TGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAG 214222
| | | || | || |||||| || ||||| ||| || | |||| ||||| ||
Sbjct 1220 TTTCATGTCGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGAGTACCAGCATTGAAGAG 1161
Query 214223 CGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGA 214282
|||||| ||||||| | | || ||| | || | || ||||||||||||||||
Sbjct 1160 GGTGGGGGAGGCATGGGTGAAGAATTTGCTCGACATCAGGTTGTAGGTCTCCAGGACACG 1101
Query 214283 GGGGATGTCGTGCTTGTGGATCTGTAGAG-CGCACCTCATCAGCATGTGCTGGGGCCTCT 214341
|| |||| ||| | || | || | ||| | |||||||||||| | ||
Sbjct 1100 CTCAATATCGTCACCCCAGATGCCGACAGACACA-CGCATGATCATGTGCTGGGGACGCT 1042
Query 214342 CTATGGGTCCTTTGGGGCC---CTTGAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAA 214398
| | || ||| | |||||| |||||||| ||||| ||||||||||| ||||
Sbjct 1041 C-AACAATC--TTGCCATCAATCTTGAGGAGGTAGGATCGCTCAAGAGTCTTGAAGCCAA 985
Query 214399 AGTA 214402
||||
Sbjct 984 AGTA 981
>seq3424
Length=5400
Score = 206 bits (228), Expect = 5e-48
Identities = 487/729 (67%), Gaps = 11/729 (2%)
Strand=Plus/Minus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||||||||| || || | ||||| |||||||| ||||| || | | |||||||||||
Sbjct 4210 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTC 4151
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957
||||||| ||||||||||| | || || ||| | || ||| | | || |
Sbjct 4150 CATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCT-TCTCGTTGCCGAGGGCGACGAGGA 4092
Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017
|| | || |||||| |||||||||| | ||||||| | ||||||||| | ||||
Sbjct 4091 GGCGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCGGCGTTCATGCCGAGCAGGG 4032
Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077
||| | |||| || || ||||||| ||| || ||||| || | || |
Sbjct 4031 CGCAGGGGAGGGCCTCGGTCAGGAACTCCTGCTCAATGGTGACGGCATCGGTGATGATGT 3972
Query 48078 GCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAA 48137
|| | | || || || | || | | | | || | ||| | ||| ||||
Sbjct 3971 CCTGGATGACCTGCT-TGCTGGCACG--GCCCTTGAGGTGGGAGTGGAGGAGGCATGCAA 3915
Query 48138 AGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCA 48197
|||| |||| | || ||||| || ||||||| ||||||| ||| || |||||||
Sbjct 3914 AGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCAGGCA 3855
Query 48198 TGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCT 48257
||| || | || ||||||||||| || | || || | || ||||||||| ||||
Sbjct 3854 TGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCT 3795
Query 48258 CCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGG 48317
| || || || || ||| ||| | || | || || | ||||||||| ||||||
Sbjct 3794 CGACGGCAGCAAAGGCGACGAGACGCTGAGCAAAGGACGAGTTCTTGTCCTGGATCCATC 3735
Query 48318 AAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCT 48377
| |||||||| |||||||| ||| || || || ||||| ||||| |||||| |
Sbjct 3734 GGATGGCCCAGTCGGCCTTCTTGCGGATACAGGGGATGGTCTCAATGGCGTTGAAGAGGT 3675
Query 48378 TCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACATCTCAG 48434
| | | | ||| ||| | ||||| | |||| ||| | ||| |||| |
Sbjct 3674 AGGTTCGTTGAGCTGGCTCCTTGATGTAGGTGTCAATGAGGAGC---GAGTAGGTCTCGG 3618
Query 48435 AGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCA 48494
|||| | ||||| || ||||||||| ||||||||| | |||||| | ||| |
Sbjct 3617 AGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGGGCCTCGGGGATCTGGA 3558
Query 48495 CTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGA 48554
| || | ||||| ||| | || ||||| ||||| || || || || ||||| ||||
Sbjct 3557 CCTCGCCGCTGAATCGCTCGACAAGGTTCTCGTTGACGATGCCGTCAGAGGCAGCGAAGA 3498
Query 48555 AGGCAAGGA 48563
|||| ||||
Sbjct 3497 AGGCGAGGA 3489
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931288482234880
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